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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=54)
MPPRASIQQTADYLGVSTKTVRNYIAAGKLKAVRLGPRLIRVERDSVEALMRPI

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4j2n-a1-m1-cC 56 54 1.0000 0.9643 1.0000 7.43e-34 4j2n-a1-m1-cB_4j2n-a1-m1-cC
2 4j2n-a1-m1-cE 54 54 1.0000 1.0000 1.0000 8.25e-34 4j2n-a1-m1-cB_4j2n-a1-m1-cE, 4j2n-a1-m1-cD_4j2n-a1-m1-cE
3 4j2n-a1-m1-cD 54 54 1.0000 1.0000 1.0000 8.25e-34 4j2n-a1-m1-cB_4j2n-a1-m1-cD, 4j2n-a1-m1-cD_4j2n-a1-m1-cE
4 4j2n-a1-m1-cB 54 54 1.0000 1.0000 1.0000 8.25e-34 4j2n-a1-m1-cB_4j2n-a1-m1-cC, 4j2n-a1-m1-cB_4j2n-a1-m1-cD, 4j2n-a1-m1-cB_4j2n-a1-m1-cE
5 4r6i-a1-m1-cB 439 20 0.1852 0.0228 0.5000 0.75 4r6i-a1-m1-cB_4r6i-a1-m1-cA
6 4r6i-a1-m1-cA 463 20 0.1852 0.0216 0.5000 0.75 4r6i-a1-m1-cB_4r6i-a1-m1-cA
7 4ce0-a1-m2-cA 213 43 0.3148 0.0798 0.3953 2.7 4ce0-a1-m1-cA_4ce0-a1-m2-cA
8 4ce0-a1-m1-cA 213 43 0.3148 0.0798 0.3953 2.7 4ce0-a1-m1-cA_4ce0-a1-m2-cA
9 4zms-a1-m1-cB 200 20 0.1852 0.0500 0.5000 4.7 4zms-a1-m1-cB_4zms-a1-m1-cA
10 4zms-a1-m1-cA 207 20 0.1852 0.0483 0.5000 4.7 4zms-a1-m1-cB_4zms-a1-m1-cA
11 3keq-a1-m1-cB 204 19 0.1852 0.0490 0.5263 5.4 3keq-a1-m1-cA_3keq-a1-m1-cB
12 3keq-a1-m1-cA 196 19 0.1852 0.0510 0.5263 5.6 3keq-a1-m1-cA_3keq-a1-m1-cB
13 3c57-a1-m1-cB 49 19 0.1481 0.1633 0.4211 8.8 3c57-a1-m1-cB_3c57-a1-m1-cA
14 3c57-a1-m1-cA 51 19 0.1481 0.1569 0.4211 9.4 3c57-a1-m1-cB_3c57-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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