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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=83)
MPQISRYSDEQVEQLLAELLNVLEKHKAPTDLSLMVLGNMVTNLINTSIAPAQRQAIANS
FARALQSSINEDKAHLEHHHHHH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2jrx-a1-m1-cB 83 83 1.0000 1.0000 1.0000 2.44e-56 2jrx-a1-m1-cA_2jrx-a1-m1-cB
2 2jrx-a1-m1-cA 83 83 1.0000 1.0000 1.0000 2.44e-56 2jrx-a1-m1-cA_2jrx-a1-m1-cB
3 2jpq-a1-m1-cB 83 78 0.5060 0.5060 0.5385 1.30e-23 2jpq-a1-m1-cA_2jpq-a1-m1-cB
4 2jpq-a1-m1-cA 83 78 0.5060 0.5060 0.5385 1.30e-23 2jpq-a1-m1-cA_2jpq-a1-m1-cB
5 2juz-a1-m1-cB 80 77 0.4458 0.4625 0.4805 2.13e-18 2juz-a1-m1-cA_2juz-a1-m1-cB
6 2juz-a1-m1-cA 80 77 0.4458 0.4625 0.4805 2.13e-18 2juz-a1-m1-cA_2juz-a1-m1-cB
7 2qti-a1-m2-cA 66 70 0.4699 0.5909 0.5571 4.52e-17 2qti-a1-m1-cA_2qti-a1-m2-cA
8 2qti-a1-m1-cA 66 70 0.4699 0.5909 0.5571 4.52e-17 2qti-a1-m1-cA_2qti-a1-m2-cA
9 2ota-a1-m1-cA 66 74 0.3735 0.4697 0.4189 4.27e-12 2ota-a1-m1-cB_2ota-a1-m1-cA
10 4ic6-a1-m2-cA 340 12 0.1084 0.0265 0.7500 0.52 4ic6-a1-m2-cC_4ic6-a1-m2-cA
11 4ic6-a1-m1-cA 340 12 0.1084 0.0265 0.7500 0.52 4ic6-a1-m2-cB_4ic6-a1-m1-cA
12 4ic6-a1-m2-cC 335 12 0.1084 0.0269 0.7500 0.56 4ic6-a1-m2-cC_4ic6-a1-m2-cA
13 4z6k-a1-m1-cC 345 42 0.1566 0.0377 0.3095 4.2 4z6k-a1-m1-cD_4z6k-a1-m1-cC
14 4z6k-a1-m1-cA 345 42 0.1566 0.0377 0.3095 4.2 4z6k-a1-m1-cD_4z6k-a1-m1-cA
15 1bra-a1-m2-cA 223 25 0.1084 0.0404 0.3600 5.2 1bra-a1-m2-cA_1bra-a1-m1-cA
16 1bra-a1-m1-cA 223 25 0.1084 0.0404 0.3600 5.2 1bra-a1-m2-cA_1bra-a1-m1-cA
17 1trm-a1-m1-cB 223 25 0.1084 0.0404 0.3600 5.3 1trm-a1-m1-cB_1trm-a1-m1-cA
18 1trm-a1-m1-cA 223 25 0.1084 0.0404 0.3600 5.3 1trm-a1-m1-cB_1trm-a1-m1-cA
19 1amh-a1-m1-cB 223 25 0.1084 0.0404 0.3600 5.4 1amh-a1-m1-cB_1amh-a1-m1-cA
20 1amh-a1-m1-cA 223 25 0.1084 0.0404 0.3600 5.4 1amh-a1-m1-cB_1amh-a1-m1-cA
21 6cv0-a1-m1-cC 993 27 0.1446 0.0121 0.4444 6.4 6cv0-a1-m1-cB_6cv0-a1-m1-cC
22 6cv0-a1-m1-cB 993 27 0.1446 0.0121 0.4444 6.4 6cv0-a1-m1-cB_6cv0-a1-m1-cC

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Reference:
Jacob Schwartz et al.

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