Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=86)
MPVVKINAIEVPAGAGPELEKRFAHRAHAVENSPGFLGFQLLRPVKGEERYFVVTHWESD
EAFQAWANGPAIAASLLEFEVVLDVG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5uq4-a1-m1-cA 86 86 1.0000 1.0000 1.0000 1.38e-58 5uq4-a1-m1-cA_5uq4-a1-m1-cB
2 5uq4-a1-m1-cB 90 87 1.0000 0.9556 0.9885 1.02e-56 5uq4-a1-m1-cA_5uq4-a1-m1-cB
3 4nl5-a2-m2-cB 100 98 0.9884 0.8500 0.8673 7.09e-54 4nl5-a2-m2-cB_4nl5-a2-m1-cA
4 4nl5-a2-m1-cA 101 98 0.9884 0.8416 0.8673 8.07e-54 4nl5-a2-m2-cB_4nl5-a2-m1-cA
5 6ds7-a1-m1-cB 99 98 0.9767 0.8485 0.8571 6.89e-53 6ds7-a1-m1-cA_6ds7-a1-m1-cB
6 6ds7-a1-m1-cA 99 98 0.9767 0.8485 0.8571 6.89e-53 6ds7-a1-m1-cA_6ds7-a1-m1-cB
7 6ple-a1-m1-cB 96 96 0.9535 0.8542 0.8542 1.50e-51 6ple-a1-m1-cA_6ple-a1-m1-cB
8 6ple-a1-m1-cA 96 96 0.9535 0.8542 0.8542 1.50e-51 6ple-a1-m1-cA_6ple-a1-m1-cB
9 1iuj-a2-m2-cA 102 69 0.3256 0.2745 0.4058 3.81e-11 1iuj-a2-m1-cA_1iuj-a2-m2-cA, 1iuj-a2-m2-cA_1iuj-a2-m2-cB
10 1iuj-a2-m1-cA 102 69 0.3256 0.2745 0.4058 3.81e-11 1iuj-a2-m1-cA_1iuj-a2-m2-cA, 1iuj-a2-m1-cA_1iuj-a2-m2-cB
11 1iuj-a2-m2-cB 103 69 0.3256 0.2718 0.4058 4.54e-11 1iuj-a2-m1-cA_1iuj-a2-m2-cB, 1iuj-a2-m2-cA_1iuj-a2-m2-cB
12 7bio-a1-m1-cA 106 62 0.1977 0.1604 0.2742 2.02e-04 7bio-a1-m1-cA_7bio-a1-m1-cB
13 7bio-a1-m1-cB 111 62 0.1977 0.1532 0.2742 4.99e-04 7bio-a1-m1-cA_7bio-a1-m1-cB
14 1xbw-a2-m1-cC 90 84 0.2326 0.2222 0.2381 5.28e-04 1xbw-a2-m1-cC_1xbw-a2-m1-cD
15 1xbw-a2-m1-cD 98 77 0.2209 0.1939 0.2468 0.003 1xbw-a2-m1-cC_1xbw-a2-m1-cD
16 3lgn-a1-m1-cB 109 66 0.1977 0.1560 0.2576 0.010 3lgn-a1-m1-cB_3lgn-a1-m1-cA
17 3lgn-a1-m1-cA 110 66 0.1977 0.1545 0.2576 0.011 3lgn-a1-m1-cB_3lgn-a1-m1-cA
18 2zdo-a2-m1-cC 108 69 0.1977 0.1574 0.2464 0.035 2zdo-a2-m1-cC_2zdo-a2-m1-cD
19 2zdo-a2-m1-cD 109 69 0.1977 0.1560 0.2464 0.035 2zdo-a2-m1-cC_2zdo-a2-m1-cD
20 3kg0-a3-m1-cC 97 51 0.1977 0.1753 0.3333 0.096 3kg0-a3-m1-cC_3kg0-a3-m2-cA
21 3kg0-a3-m2-cA 97 51 0.1977 0.1753 0.3333 0.099 3kg0-a3-m1-cC_3kg0-a3-m2-cA
22 2go8-a1-m2-cA 87 43 0.1860 0.1839 0.3721 0.20 2go8-a1-m1-cA_2go8-a1-m2-cA
23 2go8-a1-m1-cA 87 43 0.1860 0.1839 0.3721 0.20 2go8-a1-m1-cA_2go8-a1-m2-cA
24 3fgv-a1-m1-cB 91 52 0.2209 0.2088 0.3654 0.24 3fgv-a1-m1-cA_3fgv-a1-m1-cB
25 3fgv-a1-m1-cA 91 52 0.2209 0.2088 0.3654 0.24 3fgv-a1-m1-cA_3fgv-a1-m1-cB
26 1tz0-a1-m1-cC 99 64 0.1977 0.1717 0.2656 0.90 1tz0-a1-m1-cC_1tz0-a1-m1-cA
27 1tz0-a1-m1-cA 106 64 0.1977 0.1604 0.2656 1.1 1tz0-a1-m1-cC_1tz0-a1-m1-cA
28 5j4f-a1-m1-cB 97 25 0.1512 0.1340 0.5200 1.2 5j4f-a1-m1-cB_5j4f-a1-m1-cA
29 5j4f-a1-m1-cA 98 25 0.1512 0.1327 0.5200 1.2 5j4f-a1-m1-cB_5j4f-a1-m1-cA
30 3bm7-a1-m2-cA 102 56 0.2209 0.1863 0.3393 1.3 3bm7-a1-m1-cA_3bm7-a1-m2-cA
31 3bm7-a1-m1-cA 102 56 0.2209 0.1863 0.3393 1.3 3bm7-a1-m1-cA_3bm7-a1-m2-cA
32 3dz8-a1-m2-cA 178 48 0.1395 0.0674 0.2500 3.0 3dz8-a1-m1-cA_3dz8-a1-m2-cA
33 3dz8-a1-m1-cA 178 48 0.1395 0.0674 0.2500 3.0 3dz8-a1-m1-cA_3dz8-a1-m2-cA
34 5y4g-a1-m1-cB 292 32 0.1628 0.0479 0.4375 5.6 5y4g-a1-m1-cB_5y4g-a1-m1-cA
35 5y4g-a1-m1-cA 295 32 0.1628 0.0475 0.4375 5.6 5y4g-a1-m1-cB_5y4g-a1-m1-cA
36 5w25-a3-m1-cB 566 38 0.1628 0.0247 0.3684 7.6 5w25-a3-m1-cB_5w25-a3-m1-cA
37 7opq-a1-m1-cA 212 36 0.1279 0.0519 0.3056 8.2 7opq-a1-m1-cB_7opq-a1-m1-cA
38 7opq-a1-m1-cB 204 36 0.1279 0.0539 0.3056 8.4 7opq-a1-m1-cB_7opq-a1-m1-cA
39 5w25-a3-m1-cA 583 38 0.1628 0.0240 0.3684 8.4 5w25-a3-m1-cB_5w25-a3-m1-cA
40 4rmf-a1-m2-cA 579 38 0.1628 0.0242 0.3684 8.9 4rmf-a1-m1-cA_4rmf-a1-m2-cA
41 4rmf-a1-m1-cA 579 38 0.1628 0.0242 0.3684 8.9 4rmf-a1-m1-cA_4rmf-a1-m2-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600