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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=97)
MQFKVYTYKYRLFVDVQSDIIDTPGRRMVIPLASARLLSDKVSRELYPVVHIGDESWRMM
TTDMASVPVSVIGEEVADLSHRENDIKNAINLMFWGI

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1vub-a3-m4-cD 97 97 1.0000 1.0000 1.0000 6.58e-69 1vub-a3-m4-cD_1vub-a3-m2-cB, 1vub-a3-m4-cD_1vub-a3-m3-cC, 1vub-a3-m4-cD_1vub-a3-m4-cC
2 1vub-a3-m4-cC 101 101 1.0000 0.9604 0.9604 1.47e-66 1vub-a3-m4-cD_1vub-a3-m4-cC
3 1vub-a3-m3-cC 101 101 1.0000 0.9604 0.9604 1.47e-66 1vub-a3-m4-cD_1vub-a3-m3-cC
4 1vub-a3-m2-cB 101 101 1.0000 0.9604 0.9604 1.47e-66 1vub-a3-m4-cD_1vub-a3-m2-cB
5 3tcj-a1-m1-cA 104 103 0.4330 0.4038 0.4078 5.76e-20 3tcj-a1-m1-cB_3tcj-a1-m1-cA
6 3tcj-a1-m1-cB 103 103 0.4433 0.4175 0.4175 2.78e-19 3tcj-a1-m1-cB_3tcj-a1-m1-cA
7 6kuw-a1-m1-cA 474 56 0.1546 0.0316 0.2679 2.3 6kuw-a1-m1-cB_6kuw-a1-m1-cA
8 3lb5-a2-m1-cD 129 28 0.1134 0.0853 0.3929 2.8 3lb5-a2-m1-cD_3lb5-a2-m1-cC
9 3lb5-a2-m1-cC 136 28 0.1134 0.0809 0.3929 3.1 3lb5-a2-m1-cD_3lb5-a2-m1-cC
10 7agh-a2-m2-cD 296 36 0.1546 0.0507 0.4167 9.3 7agh-a2-m1-cA_7agh-a2-m2-cD
11 7agh-a2-m1-cA 295 36 0.1546 0.0508 0.4167 9.4 7agh-a2-m1-cA_7agh-a2-m2-cD

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Reference:
Jacob Schwartz et al.

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