Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=73)
MQIFVDTVQWKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESALILLLTL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6nxl-a3-m1-cD 74 73 1.0000 0.9865 1.0000 2.77e-48 6nxl-a3-m1-cC_6nxl-a3-m1-cD
2 6nxl-a3-m1-cC 73 73 1.0000 1.0000 1.0000 2.78e-48 6nxl-a3-m1-cC_6nxl-a3-m1-cD
3 6ob1-a1-m1-cA 75 73 1.0000 0.9733 1.0000 3.29e-48 6ob1-a1-m1-cA_6ob1-a1-m1-cB
4 6ob1-a1-m1-cB 75 73 0.9863 0.9600 0.9863 4.64e-47 6ob1-a1-m1-cA_6ob1-a1-m1-cB
5 6dj9-a3-m1-cJ 77 71 0.8493 0.8052 0.8732 6.12e-37 6dj9-a3-m1-cJ_6dj9-a3-m1-cI
6 6dj9-a3-m1-cI 78 71 0.8493 0.7949 0.8732 6.37e-37 6dj9-a3-m1-cJ_6dj9-a3-m1-cI
7 7rma-a1-m2-cA 75 71 0.8219 0.8000 0.8451 6.90e-37 7rma-a1-m1-cA_7rma-a1-m2-cA
8 7rma-a1-m1-cA 75 71 0.8219 0.8000 0.8451 6.90e-37 7rma-a1-m1-cA_7rma-a1-m2-cA
9 6njg-a1-m2-cC 76 73 0.7808 0.7500 0.7808 3.37e-36 6njg-a1-m1-cC_6njg-a1-m2-cC
10 6njg-a1-m1-cC 76 73 0.7808 0.7500 0.7808 3.37e-36 6njg-a1-m1-cC_6njg-a1-m2-cC
11 5o6t-a2-m1-cC 75 71 0.7671 0.7467 0.7887 4.13e-36 5o6t-a2-m1-cD_5o6t-a2-m1-cC
12 5o6s-a2-m1-cC 75 71 0.7671 0.7467 0.7887 4.13e-36 5o6s-a2-m1-cC_5o6s-a2-m1-cD
13 5o6t-a2-m1-cD 74 71 0.7671 0.7568 0.7887 5.46e-36 5o6t-a2-m1-cD_5o6t-a2-m1-cC
14 5o6s-a2-m1-cD 75 71 0.7671 0.7467 0.7887 6.48e-36 5o6s-a2-m1-cC_5o6s-a2-m1-cD
15 8cx9-a4-m1-cJ 74 73 0.8082 0.7973 0.8082 3.30e-35 8cx9-a4-m1-cH_8cx9-a4-m1-cJ
16 8cx9-a4-m1-cH 74 73 0.8082 0.7973 0.8082 3.30e-35 8cx9-a4-m1-cH_8cx9-a4-m1-cJ
17 5tog-a2-m2-cA 75 67 0.7808 0.7600 0.8507 5.77e-34 5tog-a2-m1-cA_5tog-a2-m2-cA
18 5tog-a2-m1-cA 75 67 0.7808 0.7600 0.8507 5.77e-34 5tog-a2-m1-cA_5tog-a2-m2-cA
19 1ndd-a5-m1-cB 76 73 0.4795 0.4605 0.4795 4.81e-20 1ndd-a5-m1-cD_1ndd-a5-m1-cB
20 1ndd-a5-m1-cD 73 73 0.4795 0.4795 0.4795 5.08e-20 1ndd-a5-m1-cC_1ndd-a5-m1-cD, 1ndd-a5-m1-cD_1ndd-a5-m1-cA, 1ndd-a5-m1-cD_1ndd-a5-m1-cB
21 1ndd-a5-m1-cC 73 73 0.4795 0.4795 0.4795 5.08e-20 1ndd-a5-m1-cC_1ndd-a5-m1-cD
22 1ndd-a5-m1-cA 74 73 0.4795 0.4730 0.4795 5.21e-20 1ndd-a5-m1-cD_1ndd-a5-m1-cA
23 2wyq-a1-m2-cA 77 73 0.3288 0.3117 0.3288 4.05e-08 2wyq-a1-m1-cA_2wyq-a1-m2-cA
24 2wyq-a1-m1-cA 77 73 0.3288 0.3117 0.3288 4.05e-08 2wyq-a1-m1-cA_2wyq-a1-m2-cA
25 7mrj-a1-m1-cB 75 58 0.2055 0.2000 0.2586 0.007 7mrj-a1-m1-cB_7mrj-a1-m1-cA
26 7mrj-a1-m1-cA 85 58 0.2055 0.1765 0.2586 0.007 7mrj-a1-m1-cB_7mrj-a1-m1-cA
27 3qa8-a2-m1-cH 541 58 0.2329 0.0314 0.2931 0.39 3qa8-a2-m1-cH_3qa8-a2-m1-cE
28 3qa8-a2-m1-cF 622 58 0.2329 0.0273 0.2931 0.39 3qa8-a2-m1-cE_3qa8-a2-m1-cF
29 3qa8-a2-m1-cE 622 58 0.2329 0.0273 0.2931 0.39 3qa8-a2-m1-cE_3qa8-a2-m1-cF, 3qa8-a2-m1-cH_3qa8-a2-m1-cE
30 5lnl-a1-m1-cB 132 41 0.1781 0.0985 0.3171 1.4 5lnl-a1-m1-cB_5lnl-a1-m1-cC
31 5lnl-a1-m1-cC 133 41 0.1781 0.0977 0.3171 1.5 5lnl-a1-m1-cB_5lnl-a1-m1-cC
32 3ics-a1-m1-cB 538 33 0.1918 0.0260 0.4242 4.3 3ics-a1-m1-cB_3ics-a1-m1-cA
33 3ics-a1-m1-cA 539 33 0.1918 0.0260 0.4242 4.3 3ics-a1-m1-cB_3ics-a1-m1-cA
34 4kik-a1-m1-cB 648 31 0.1507 0.0170 0.3548 5.2 4kik-a1-m1-cA_4kik-a1-m1-cB
35 4kik-a1-m1-cA 618 31 0.1507 0.0178 0.3548 5.3 4kik-a1-m1-cA_4kik-a1-m1-cB
36 2rdl-a1-m2-cB 226 28 0.1370 0.0442 0.3571 5.7 2rdl-a1-m2-cB_2rdl-a1-m1-cA
37 2rdl-a1-m1-cA 226 28 0.1370 0.0442 0.3571 5.7 2rdl-a1-m2-cB_2rdl-a1-m1-cA
38 5jxf-a4-m1-cC 682 20 0.1507 0.0161 0.5500 5.7 5jxf-a4-m1-cC_5jxf-a4-m5-cB
39 6h56-a1-m1-cA 181 20 0.1233 0.0497 0.4500 5.9 6h56-a1-m1-cB_6h56-a1-m1-cA
40 4e3c-a3-m1-cE 624 31 0.1507 0.0176 0.3548 5.9 4e3c-a3-m1-cD_4e3c-a3-m1-cE
41 4e3c-a3-m1-cD 624 31 0.1507 0.0176 0.3548 5.9 4e3c-a3-m1-cD_4e3c-a3-m1-cE
42 3mkq-a1-m1-cE 810 35 0.1370 0.0123 0.2857 5.9 3mkq-a1-m1-cE_3mkq-a1-m1-cC
43 3mkq-a1-m1-cC 811 35 0.1370 0.0123 0.2857 5.9 3mkq-a1-m1-cE_3mkq-a1-m1-cC
44 6h56-a1-m1-cB 179 20 0.1233 0.0503 0.4500 6.0 6h56-a1-m1-cB_6h56-a1-m1-cA
45 5jxf-a4-m5-cB 692 20 0.1507 0.0159 0.5500 6.1 5jxf-a4-m1-cC_5jxf-a4-m5-cB
46 6bxz-a1-m1-cC 334 57 0.1918 0.0419 0.2456 6.9 6bxz-a1-m1-cA_6bxz-a1-m1-cC
47 1ulq-a2-m1-cF 398 44 0.1507 0.0276 0.2500 7.4 1ulq-a2-m1-cF_1ulq-a2-m1-cH
48 1ulq-a2-m1-cH 399 44 0.1507 0.0276 0.2500 7.4 1ulq-a2-m1-cE_1ulq-a2-m1-cH, 1ulq-a2-m1-cF_1ulq-a2-m1-cH, 1ulq-a2-m1-cG_1ulq-a2-m1-cH
49 1ulq-a2-m1-cG 399 44 0.1507 0.0276 0.2500 7.4 1ulq-a2-m1-cG_1ulq-a2-m1-cH
50 1ulq-a2-m1-cE 399 44 0.1507 0.0276 0.2500 7.4 1ulq-a2-m1-cE_1ulq-a2-m1-cH

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600