Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=74)
MQIFVDTVQWKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESALILLLTLR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6nxl-a3-m1-cD 74 74 1.0000 1.0000 1.0000 3.07e-49 6nxl-a3-m1-cC_6nxl-a3-m1-cD
2 6ob1-a1-m1-cA 75 74 1.0000 0.9867 1.0000 3.85e-49 6ob1-a1-m1-cA_6ob1-a1-m1-cB
3 6nxl-a3-m1-cC 73 73 0.9865 1.0000 1.0000 2.81e-48 6nxl-a3-m1-cC_6nxl-a3-m1-cD
4 6ob1-a1-m1-cB 75 74 0.9865 0.9733 0.9865 6.34e-48 6ob1-a1-m1-cA_6ob1-a1-m1-cB
5 6dj9-a3-m1-cJ 77 76 0.8649 0.8312 0.8421 1.05e-37 6dj9-a3-m1-cJ_6dj9-a3-m1-cI
6 6dj9-a3-m1-cI 78 76 0.8649 0.8205 0.8421 1.10e-37 6dj9-a3-m1-cJ_6dj9-a3-m1-cI
7 6njg-a1-m2-cC 76 74 0.7838 0.7632 0.7838 4.51e-37 6njg-a1-m1-cC_6njg-a1-m2-cC
8 6njg-a1-m1-cC 76 74 0.7838 0.7632 0.7838 4.51e-37 6njg-a1-m1-cC_6njg-a1-m2-cC
9 7rma-a1-m2-cA 75 74 0.8243 0.8133 0.8243 7.51e-37 7rma-a1-m1-cA_7rma-a1-m2-cA
10 7rma-a1-m1-cA 75 74 0.8243 0.8133 0.8243 7.51e-37 7rma-a1-m1-cA_7rma-a1-m2-cA
11 5o6t-a2-m1-cC 75 74 0.7568 0.7467 0.7568 4.21e-36 5o6t-a2-m1-cD_5o6t-a2-m1-cC
12 5o6s-a2-m1-cC 75 74 0.7568 0.7467 0.7568 4.21e-36 5o6s-a2-m1-cC_5o6s-a2-m1-cD
13 8cx9-a4-m1-cJ 74 74 0.8108 0.8108 0.8108 4.57e-36 8cx9-a4-m1-cH_8cx9-a4-m1-cJ
14 8cx9-a4-m1-cH 74 74 0.8108 0.8108 0.8108 4.57e-36 8cx9-a4-m1-cH_8cx9-a4-m1-cJ
15 5o6t-a2-m1-cD 74 71 0.7568 0.7568 0.7887 5.75e-36 5o6t-a2-m1-cD_5o6t-a2-m1-cC
16 5o6s-a2-m1-cD 75 71 0.7568 0.7467 0.7887 6.25e-36 5o6s-a2-m1-cC_5o6s-a2-m1-cD
17 5tog-a2-m2-cA 75 67 0.7703 0.7600 0.8507 6.35e-34 5tog-a2-m1-cA_5tog-a2-m2-cA
18 5tog-a2-m1-cA 75 67 0.7703 0.7600 0.8507 6.35e-34 5tog-a2-m1-cA_5tog-a2-m2-cA
19 1ndd-a5-m1-cB 76 74 0.4865 0.4737 0.4865 6.74e-21 1ndd-a5-m1-cD_1ndd-a5-m1-cB
20 1ndd-a5-m1-cA 74 74 0.4865 0.4865 0.4865 7.06e-21 1ndd-a5-m1-cD_1ndd-a5-m1-cA
21 1ndd-a5-m1-cD 73 73 0.4730 0.4795 0.4795 5.58e-20 1ndd-a5-m1-cC_1ndd-a5-m1-cD, 1ndd-a5-m1-cD_1ndd-a5-m1-cA, 1ndd-a5-m1-cD_1ndd-a5-m1-cB
22 1ndd-a5-m1-cC 73 73 0.4730 0.4795 0.4795 5.58e-20 1ndd-a5-m1-cC_1ndd-a5-m1-cD
23 2wyq-a1-m2-cA 77 73 0.3243 0.3117 0.3288 4.20e-08 2wyq-a1-m1-cA_2wyq-a1-m2-cA
24 2wyq-a1-m1-cA 77 73 0.3243 0.3117 0.3288 4.20e-08 2wyq-a1-m1-cA_2wyq-a1-m2-cA
25 7mrj-a1-m1-cA 85 58 0.2027 0.1765 0.2586 0.007 7mrj-a1-m1-cB_7mrj-a1-m1-cA
26 7mrj-a1-m1-cB 75 58 0.2027 0.2000 0.2586 0.008 7mrj-a1-m1-cB_7mrj-a1-m1-cA
27 3qa8-a2-m1-cH 541 58 0.2297 0.0314 0.2931 0.31 3qa8-a2-m1-cH_3qa8-a2-m1-cE
28 3qa8-a2-m1-cF 622 58 0.2297 0.0273 0.2931 0.32 3qa8-a2-m1-cE_3qa8-a2-m1-cF
29 3qa8-a2-m1-cE 622 58 0.2297 0.0273 0.2931 0.32 3qa8-a2-m1-cE_3qa8-a2-m1-cF, 3qa8-a2-m1-cH_3qa8-a2-m1-cE
30 5lnl-a1-m1-cB 132 41 0.1757 0.0985 0.3171 1.5 5lnl-a1-m1-cB_5lnl-a1-m1-cC
31 5lnl-a1-m1-cC 133 41 0.1757 0.0977 0.3171 1.6 5lnl-a1-m1-cB_5lnl-a1-m1-cC
32 3ics-a1-m1-cA 539 33 0.1892 0.0260 0.4242 4.6 3ics-a1-m1-cB_3ics-a1-m1-cA
33 3ics-a1-m1-cB 538 33 0.1892 0.0260 0.4242 4.7 3ics-a1-m1-cB_3ics-a1-m1-cA
34 4kik-a1-m1-cA 618 31 0.1486 0.0178 0.3548 5.1 4kik-a1-m1-cA_4kik-a1-m1-cB
35 4kik-a1-m1-cB 648 31 0.1486 0.0170 0.3548 5.1 4kik-a1-m1-cA_4kik-a1-m1-cB
36 4e3c-a3-m1-cE 624 31 0.1486 0.0176 0.3548 5.5 4e3c-a3-m1-cD_4e3c-a3-m1-cE
37 4e3c-a3-m1-cD 624 31 0.1486 0.0176 0.3548 5.5 4e3c-a3-m1-cD_4e3c-a3-m1-cE
38 3mkq-a1-m1-cE 810 35 0.1351 0.0123 0.2857 5.6 3mkq-a1-m1-cE_3mkq-a1-m1-cC
39 3mkq-a1-m1-cC 811 35 0.1351 0.0123 0.2857 5.6 3mkq-a1-m1-cE_3mkq-a1-m1-cC
40 5jxf-a4-m1-cC 682 20 0.1486 0.0161 0.5500 5.6 5jxf-a4-m1-cC_5jxf-a4-m5-cB
41 5jxf-a4-m5-cB 692 20 0.1486 0.0159 0.5500 5.7 5jxf-a4-m1-cC_5jxf-a4-m5-cB
42 2rdl-a1-m2-cB 226 28 0.1351 0.0442 0.3571 5.9 2rdl-a1-m2-cB_2rdl-a1-m1-cA
43 2rdl-a1-m1-cA 226 28 0.1351 0.0442 0.3571 5.9 2rdl-a1-m2-cB_2rdl-a1-m1-cA
44 6h56-a1-m1-cA 181 20 0.1216 0.0497 0.4500 6.2 6h56-a1-m1-cB_6h56-a1-m1-cA
45 6h56-a1-m1-cB 179 20 0.1216 0.0503 0.4500 6.5 6h56-a1-m1-cB_6h56-a1-m1-cA
46 6bxz-a1-m1-cC 334 57 0.1892 0.0419 0.2456 7.1 6bxz-a1-m1-cA_6bxz-a1-m1-cC
47 1ulq-a2-m1-cF 398 44 0.1486 0.0276 0.2500 7.7 1ulq-a2-m1-cF_1ulq-a2-m1-cH
48 1ulq-a2-m1-cH 399 44 0.1486 0.0276 0.2500 7.7 1ulq-a2-m1-cE_1ulq-a2-m1-cH, 1ulq-a2-m1-cF_1ulq-a2-m1-cH, 1ulq-a2-m1-cG_1ulq-a2-m1-cH
49 1ulq-a2-m1-cG 399 44 0.1486 0.0276 0.2500 7.7 1ulq-a2-m1-cG_1ulq-a2-m1-cH
50 1ulq-a2-m1-cE 399 44 0.1486 0.0276 0.2500 7.7 1ulq-a2-m1-cE_1ulq-a2-m1-cH
51 7skb-a2-m1-cD 373 68 0.2838 0.0563 0.3088 9.2 7skb-a2-m1-cC_7skb-a2-m1-cD

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600