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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=76)
MQIFVQTITVMRIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGMQLEDGRTLSDYN
IKRDSNLYLVSSLRSL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6njg-a1-m2-cC 76 76 1.0000 1.0000 1.0000 2.45e-51 6njg-a1-m1-cC_6njg-a1-m2-cC
2 6njg-a1-m1-cC 76 76 1.0000 1.0000 1.0000 2.45e-51 6njg-a1-m1-cC_6njg-a1-m2-cC
3 6nxl-a3-m1-cD 74 74 0.7632 0.7838 0.7838 4.63e-37 6nxl-a3-m1-cC_6nxl-a3-m1-cD
4 6ob1-a1-m1-cA 75 74 0.7632 0.7733 0.7838 5.87e-37 6ob1-a1-m1-cA_6ob1-a1-m1-cB
5 6nxl-a3-m1-cC 73 73 0.7500 0.7808 0.7808 3.51e-36 6nxl-a3-m1-cC_6nxl-a3-m1-cD
6 6ob1-a1-m1-cB 75 74 0.7500 0.7600 0.7703 9.44e-36 6ob1-a1-m1-cA_6ob1-a1-m1-cB
7 8cx9-a4-m1-cJ 74 74 0.7500 0.7703 0.7703 1.21e-34 8cx9-a4-m1-cH_8cx9-a4-m1-cJ
8 8cx9-a4-m1-cH 74 74 0.7500 0.7703 0.7703 1.21e-34 8cx9-a4-m1-cH_8cx9-a4-m1-cJ
9 7rma-a1-m2-cA 75 70 0.7237 0.7333 0.7857 1.55e-34 7rma-a1-m1-cA_7rma-a1-m2-cA
10 7rma-a1-m1-cA 75 70 0.7237 0.7333 0.7857 1.55e-34 7rma-a1-m1-cA_7rma-a1-m2-cA
11 6dj9-a3-m1-cJ 77 76 0.7632 0.7532 0.7632 2.28e-34 6dj9-a3-m1-cJ_6dj9-a3-m1-cI
12 6dj9-a3-m1-cI 78 76 0.7632 0.7436 0.7632 2.42e-34 6dj9-a3-m1-cJ_6dj9-a3-m1-cI
13 5o6t-a2-m1-cC 75 70 0.7237 0.7333 0.7857 4.26e-34 5o6t-a2-m1-cD_5o6t-a2-m1-cC
14 5o6s-a2-m1-cC 75 70 0.7237 0.7333 0.7857 4.26e-34 5o6s-a2-m1-cC_5o6s-a2-m1-cD
15 5o6t-a2-m1-cD 74 70 0.7237 0.7432 0.7857 4.93e-34 5o6t-a2-m1-cD_5o6t-a2-m1-cC
16 5o6s-a2-m1-cD 75 70 0.7237 0.7333 0.7857 5.72e-34 5o6s-a2-m1-cC_5o6s-a2-m1-cD
17 5tog-a2-m2-cA 75 73 0.6974 0.7067 0.7260 7.49e-31 5tog-a2-m1-cA_5tog-a2-m2-cA
18 5tog-a2-m1-cA 75 73 0.6974 0.7067 0.7260 7.49e-31 5tog-a2-m1-cA_5tog-a2-m2-cA
19 1ndd-a5-m1-cB 76 75 0.4605 0.4605 0.4667 1.22e-20 1ndd-a5-m1-cD_1ndd-a5-m1-cB
20 1ndd-a5-m1-cA 74 74 0.4605 0.4730 0.4730 1.72e-20 1ndd-a5-m1-cD_1ndd-a5-m1-cA
21 1ndd-a5-m1-cD 73 73 0.4474 0.4658 0.4658 1.18e-19 1ndd-a5-m1-cC_1ndd-a5-m1-cD, 1ndd-a5-m1-cD_1ndd-a5-m1-cA, 1ndd-a5-m1-cD_1ndd-a5-m1-cB
22 1ndd-a5-m1-cC 73 73 0.4474 0.4658 0.4658 1.18e-19 1ndd-a5-m1-cC_1ndd-a5-m1-cD
23 2wyq-a1-m2-cA 77 62 0.2632 0.2597 0.3226 0.002 2wyq-a1-m1-cA_2wyq-a1-m2-cA
24 2wyq-a1-m1-cA 77 62 0.2632 0.2597 0.3226 0.002 2wyq-a1-m1-cA_2wyq-a1-m2-cA
25 7mrj-a1-m1-cB 75 59 0.2105 0.2133 0.2712 0.11 7mrj-a1-m1-cB_7mrj-a1-m1-cA
26 7mrj-a1-m1-cA 85 59 0.2105 0.1882 0.2712 0.12 7mrj-a1-m1-cB_7mrj-a1-m1-cA
27 3qa8-a2-m1-cF 622 46 0.1974 0.0241 0.3261 0.20 3qa8-a2-m1-cE_3qa8-a2-m1-cF
28 3qa8-a2-m1-cE 622 46 0.1974 0.0241 0.3261 0.20 3qa8-a2-m1-cE_3qa8-a2-m1-cF, 3qa8-a2-m1-cH_3qa8-a2-m1-cE
29 3qa8-a2-m1-cH 541 46 0.1974 0.0277 0.3261 0.20 3qa8-a2-m1-cH_3qa8-a2-m1-cE
30 1pyo-a1-m1-cB 98 68 0.2368 0.1837 0.2647 1.0 1pyo-a1-m1-cB_1pyo-a1-m1-cD
31 1pyo-a1-m1-cD 99 68 0.2368 0.1818 0.2647 1.1 1pyo-a1-m1-cB_1pyo-a1-m1-cD
32 4kik-a1-m1-cA 618 35 0.1711 0.0210 0.3714 5.1 4kik-a1-m1-cA_4kik-a1-m1-cB
33 4kik-a1-m1-cB 648 35 0.1711 0.0201 0.3714 5.4 4kik-a1-m1-cA_4kik-a1-m1-cB
34 4e3c-a3-m1-cE 624 35 0.1711 0.0208 0.3714 5.8 4e3c-a3-m1-cD_4e3c-a3-m1-cE
35 4e3c-a3-m1-cD 624 35 0.1711 0.0208 0.3714 5.8 4e3c-a3-m1-cD_4e3c-a3-m1-cE
36 6zy9-a1-m1-cD 108 55 0.1842 0.1296 0.2545 7.0 6zy9-a1-m1-cD_6zy9-a1-m1-cI
37 3m6y-a2-m1-cA 248 26 0.1579 0.0484 0.4615 7.2 3m6y-a2-m2-cB_3m6y-a2-m1-cA
38 3m6y-a4-m1-cC 245 26 0.1579 0.0490 0.4615 7.5 3m6y-a4-m1-cC_3m6y-a4-m1-cB
39 3m6y-a4-m1-cB 247 26 0.1579 0.0486 0.4615 7.6 3m6y-a4-m1-cC_3m6y-a4-m1-cB
40 3m6y-a2-m2-cB 247 26 0.1579 0.0486 0.4615 7.6 3m6y-a2-m2-cB_3m6y-a2-m1-cA

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Reference:
Jacob Schwartz et al.

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