Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=77)
MQIFVSTAWFCGKLITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD
YNIQKESGLQLHRRLRP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6dj9-a3-m1-cJ 77 77 1.0000 1.0000 1.0000 1.55e-53 6dj9-a3-m1-cJ_6dj9-a3-m1-cI
2 6dj9-a3-m1-cI 78 77 1.0000 0.9872 1.0000 1.65e-53 6dj9-a3-m1-cJ_6dj9-a3-m1-cI
3 6nxl-a3-m1-cD 74 76 0.8312 0.8649 0.8421 1.10e-37 6nxl-a3-m1-cC_6nxl-a3-m1-cD
4 6ob1-a1-m1-cA 75 76 0.8312 0.8533 0.8421 1.48e-37 6ob1-a1-m1-cA_6ob1-a1-m1-cB
5 6nxl-a3-m1-cC 73 71 0.8052 0.8493 0.8732 6.46e-37 6nxl-a3-m1-cC_6nxl-a3-m1-cD
6 6ob1-a1-m1-cB 75 76 0.8182 0.8400 0.8289 2.34e-36 6ob1-a1-m1-cA_6ob1-a1-m1-cB
7 6njg-a1-m2-cC 76 76 0.7532 0.7632 0.7632 2.31e-34 6njg-a1-m1-cC_6njg-a1-m2-cC
8 6njg-a1-m1-cC 76 76 0.7532 0.7632 0.7632 2.31e-34 6njg-a1-m1-cC_6njg-a1-m2-cC
9 5tog-a2-m2-cA 75 75 0.7792 0.8000 0.8000 5.23e-34 5tog-a2-m1-cA_5tog-a2-m2-cA
10 5tog-a2-m1-cA 75 75 0.7792 0.8000 0.8000 5.23e-34 5tog-a2-m1-cA_5tog-a2-m2-cA
11 7rma-a1-m2-cA 75 71 0.7403 0.7600 0.8028 3.57e-33 7rma-a1-m1-cA_7rma-a1-m2-cA
12 7rma-a1-m1-cA 75 71 0.7403 0.7600 0.8028 3.57e-33 7rma-a1-m1-cA_7rma-a1-m2-cA
13 8cx9-a4-m1-cJ 74 76 0.7662 0.7973 0.7763 1.76e-32 8cx9-a4-m1-cH_8cx9-a4-m1-cJ
14 8cx9-a4-m1-cH 74 76 0.7662 0.7973 0.7763 1.76e-32 8cx9-a4-m1-cH_8cx9-a4-m1-cJ
15 5o6t-a2-m1-cD 74 71 0.7143 0.7432 0.7746 2.82e-32 5o6t-a2-m1-cD_5o6t-a2-m1-cC
16 5o6t-a2-m1-cC 75 71 0.7143 0.7333 0.7746 3.03e-32 5o6t-a2-m1-cD_5o6t-a2-m1-cC
17 5o6s-a2-m1-cC 75 71 0.7143 0.7333 0.7746 3.03e-32 5o6s-a2-m1-cC_5o6s-a2-m1-cD
18 5o6s-a2-m1-cD 75 71 0.7143 0.7333 0.7746 4.45e-32 5o6s-a2-m1-cC_5o6s-a2-m1-cD
19 1ndd-a5-m1-cA 74 74 0.4156 0.4324 0.4324 1.51e-18 1ndd-a5-m1-cD_1ndd-a5-m1-cA
20 1ndd-a5-m1-cB 76 74 0.4156 0.4211 0.4324 1.92e-18 1ndd-a5-m1-cD_1ndd-a5-m1-cB
21 1ndd-a5-m1-cD 73 69 0.3896 0.4110 0.4348 5.30e-18 1ndd-a5-m1-cC_1ndd-a5-m1-cD, 1ndd-a5-m1-cD_1ndd-a5-m1-cA, 1ndd-a5-m1-cD_1ndd-a5-m1-cB
22 1ndd-a5-m1-cC 73 69 0.3896 0.4110 0.4348 5.30e-18 1ndd-a5-m1-cC_1ndd-a5-m1-cD
23 2wyq-a1-m2-cA 77 54 0.2468 0.2468 0.3519 2.57e-04 2wyq-a1-m1-cA_2wyq-a1-m2-cA
24 2wyq-a1-m1-cA 77 54 0.2468 0.2468 0.3519 2.57e-04 2wyq-a1-m1-cA_2wyq-a1-m2-cA
25 7mrj-a1-m1-cA 85 58 0.2078 0.1882 0.2759 0.024 7mrj-a1-m1-cB_7mrj-a1-m1-cA
26 7mrj-a1-m1-cB 75 58 0.2078 0.2133 0.2759 0.028 7mrj-a1-m1-cB_7mrj-a1-m1-cA
27 3qa8-a2-m1-cH 541 58 0.2338 0.0333 0.3103 0.046 3qa8-a2-m1-cH_3qa8-a2-m1-cE
28 3qa8-a2-m1-cF 622 58 0.2338 0.0289 0.3103 0.048 3qa8-a2-m1-cE_3qa8-a2-m1-cF
29 3qa8-a2-m1-cE 622 58 0.2338 0.0289 0.3103 0.048 3qa8-a2-m1-cE_3qa8-a2-m1-cF, 3qa8-a2-m1-cH_3qa8-a2-m1-cE
30 4kik-a1-m1-cA 618 35 0.1558 0.0194 0.3429 0.92 4kik-a1-m1-cA_4kik-a1-m1-cB
31 4kik-a1-m1-cB 648 35 0.1558 0.0185 0.3429 0.94 4kik-a1-m1-cA_4kik-a1-m1-cB
32 4e3c-a3-m1-cE 624 35 0.1558 0.0192 0.3429 1.1 4e3c-a3-m1-cD_4e3c-a3-m1-cE
33 4e3c-a3-m1-cD 624 35 0.1558 0.0192 0.3429 1.1 4e3c-a3-m1-cD_4e3c-a3-m1-cE
34 5mz4-a1-m1-cA 704 32 0.1299 0.0142 0.3125 4.0 5mz4-a1-m1-cB_5mz4-a1-m1-cA
35 1i9g-a2-m4-cA 264 47 0.1948 0.0568 0.3191 4.7 1i9g-a2-m2-cA_1i9g-a2-m4-cA, 1i9g-a2-m3-cA_1i9g-a2-m4-cA
36 1i9g-a2-m3-cA 264 47 0.1948 0.0568 0.3191 4.7 1i9g-a2-m3-cA_1i9g-a2-m4-cA
37 1i9g-a2-m2-cA 264 47 0.1948 0.0568 0.3191 4.7 1i9g-a2-m2-cA_1i9g-a2-m4-cA
38 5jxf-a4-m1-cC 682 20 0.1429 0.0161 0.5500 4.7 5jxf-a4-m1-cC_5jxf-a4-m5-cB
39 5jxf-a4-m5-cB 692 20 0.1429 0.0159 0.5500 5.0 5jxf-a4-m1-cC_5jxf-a4-m5-cB
40 5lnl-a1-m1-cB 132 39 0.1558 0.0909 0.3077 7.8 5lnl-a1-m1-cB_5lnl-a1-m1-cC
41 5lnl-a1-m1-cC 133 39 0.1558 0.0902 0.3077 8.6 5lnl-a1-m1-cB_5lnl-a1-m1-cC
42 6bxz-a1-m1-cC 334 46 0.1818 0.0419 0.3043 8.9 6bxz-a1-m1-cA_6bxz-a1-m1-cC
43 7qyp-a1-m1-cB 519 34 0.1429 0.0212 0.3235 9.6 7qyp-a1-m1-cA_7qyp-a1-m1-cB
44 7qyp-a1-m1-cA 519 34 0.1429 0.0212 0.3235 9.6 7qyp-a1-m1-cA_7qyp-a1-m1-cB
45 3zdr-a1-m2-cA 402 66 0.1948 0.0373 0.2273 9.8 3zdr-a1-m1-cA_3zdr-a1-m2-cA
46 3zdr-a1-m1-cA 402 66 0.1948 0.0373 0.2273 9.8 3zdr-a1-m1-cA_3zdr-a1-m2-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600