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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=95)
MQIGRVRGTVVSSQKEPSMVGVKFLLLQLIDEAGQPLPQYEVAADGVGAGLDEWVLFSRG
SAARQVAGSEKRPVDAVVIGIIDTVSVDNRPLYSK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4jw0-a1-m1-cD 95 95 1.0000 1.0000 1.0000 3.20e-64 4jw0-a1-m1-cC_4jw0-a1-m1-cD
2 4jw0-a1-m1-cC 95 95 1.0000 1.0000 1.0000 3.20e-64 4jw0-a1-m1-cC_4jw0-a1-m1-cD
3 2qw7-a2-m1-cJ 96 95 0.6000 0.5938 0.6000 2.25e-36 2qw7-a2-m1-cI_2qw7-a2-m1-cJ
4 2qw7-a2-m1-cI 96 95 0.6000 0.5938 0.6000 2.25e-36 2qw7-a2-m1-cI_2qw7-a2-m1-cJ
5 2z9h-a1-m1-cB 97 95 0.4000 0.3918 0.4000 4.16e-19 2z9h-a1-m1-cC_2z9h-a1-m1-cB
6 4i7a-a1-m1-cE 87 90 0.4000 0.4368 0.4222 7.94e-15 4i7a-a1-m1-cD_4i7a-a1-m1-cE
7 4i7a-a1-m1-cD 87 90 0.4000 0.4368 0.4222 7.94e-15 4i7a-a1-m1-cD_4i7a-a1-m1-cE
8 2hd3-a1-m1-cD 93 90 0.3895 0.3978 0.4111 8.54e-15 2hd3-a1-m1-cC_2hd3-a1-m1-cD
9 2z9h-a1-m1-cC 83 95 0.3368 0.3855 0.3368 1.10e-11 2z9h-a1-m1-cC_2z9h-a1-m1-cB
10 2rcf-a1-m1-cE 80 83 0.3579 0.4250 0.4096 5.80e-09 2rcf-a1-m1-cD_2rcf-a1-m1-cE
11 2rcf-a1-m1-cD 80 83 0.3579 0.4250 0.4096 5.80e-09 2rcf-a1-m1-cD_2rcf-a1-m1-cE
12 2hd3-a1-m1-cC 81 90 0.3263 0.3827 0.3444 6.55e-07 2hd3-a1-m1-cC_2hd3-a1-m1-cD
13 6jy5-a1-m1-cD 82 83 0.2737 0.3171 0.3133 5.72e-04 6jy5-a1-m1-cB_6jy5-a1-m1-cD
14 6jy5-a1-m1-cB 82 83 0.2737 0.3171 0.3133 5.72e-04 6jy5-a1-m1-cB_6jy5-a1-m1-cD
15 5l37-a1-m1-cE 78 42 0.1789 0.2179 0.4048 0.015 5l37-a1-m1-cD_5l37-a1-m1-cE
16 5l37-a1-m1-cD 77 41 0.1684 0.2078 0.3902 0.12 5l37-a1-m1-cD_5l37-a1-m1-cE
17 3oa6-a1-m1-cB 84 24 0.0842 0.0952 0.3333 5.0 3oa6-a1-m1-cA_3oa6-a1-m1-cB
18 3oa6-a1-m1-cA 84 24 0.0842 0.0952 0.3333 5.0 3oa6-a1-m1-cA_3oa6-a1-m1-cB
19 6ijc-a1-m1-cA 560 57 0.1895 0.0321 0.3158 7.1 6ijc-a1-m1-cA_6ijc-a1-m1-cB
20 6ijc-a1-m1-cB 562 57 0.1895 0.0320 0.3158 7.1 6ijc-a1-m1-cA_6ijc-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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