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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=74)
MQISVKTLMRKRITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFSGMLLEDGRTLSDYN
IQKGSTLTLGLILR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 8cx9-a4-m1-cJ 74 74 1.0000 1.0000 1.0000 1.21e-48 8cx9-a4-m1-cH_8cx9-a4-m1-cJ
2 8cx9-a4-m1-cH 74 74 1.0000 1.0000 1.0000 1.21e-48 8cx9-a4-m1-cH_8cx9-a4-m1-cJ
3 6nxl-a3-m1-cD 74 74 0.8108 0.8108 0.8108 4.57e-36 6nxl-a3-m1-cC_6nxl-a3-m1-cD
4 6ob1-a1-m1-cA 75 74 0.8108 0.8000 0.8108 6.46e-36 6ob1-a1-m1-cA_6ob1-a1-m1-cB
5 6nxl-a3-m1-cC 73 73 0.7973 0.8082 0.8082 3.35e-35 6nxl-a3-m1-cC_6nxl-a3-m1-cD
6 6ob1-a1-m1-cB 75 74 0.7973 0.7867 0.7973 9.31e-35 6ob1-a1-m1-cA_6ob1-a1-m1-cB
7 6njg-a1-m2-cC 76 74 0.7703 0.7500 0.7703 1.18e-34 6njg-a1-m1-cC_6njg-a1-m2-cC
8 6njg-a1-m1-cC 76 74 0.7703 0.7500 0.7703 1.18e-34 6njg-a1-m1-cC_6njg-a1-m2-cC
9 6dj9-a3-m1-cJ 77 76 0.7973 0.7662 0.7763 1.69e-32 6dj9-a3-m1-cJ_6dj9-a3-m1-cI
10 6dj9-a3-m1-cI 78 76 0.7973 0.7564 0.7763 1.90e-32 6dj9-a3-m1-cJ_6dj9-a3-m1-cI
11 5o6t-a2-m1-cC 75 69 0.7297 0.7200 0.7826 5.24e-32 5o6t-a2-m1-cD_5o6t-a2-m1-cC
12 5o6s-a2-m1-cC 75 69 0.7297 0.7200 0.7826 5.24e-32 5o6s-a2-m1-cC_5o6s-a2-m1-cD
13 5o6t-a2-m1-cD 74 69 0.7297 0.7297 0.7826 5.88e-32 5o6t-a2-m1-cD_5o6t-a2-m1-cC
14 5o6s-a2-m1-cD 75 69 0.7297 0.7200 0.7826 7.28e-32 5o6s-a2-m1-cC_5o6s-a2-m1-cD
15 7rma-a1-m2-cA 75 74 0.7297 0.7200 0.7297 3.00e-31 7rma-a1-m1-cA_7rma-a1-m2-cA
16 7rma-a1-m1-cA 75 74 0.7297 0.7200 0.7297 3.00e-31 7rma-a1-m1-cA_7rma-a1-m2-cA
17 5tog-a2-m2-cA 75 67 0.7297 0.7200 0.8060 7.96e-31 5tog-a2-m1-cA_5tog-a2-m2-cA
18 5tog-a2-m1-cA 75 67 0.7297 0.7200 0.8060 7.96e-31 5tog-a2-m1-cA_5tog-a2-m2-cA
19 1ndd-a5-m1-cA 74 74 0.5135 0.5135 0.5135 2.02e-21 1ndd-a5-m1-cD_1ndd-a5-m1-cA
20 1ndd-a5-m1-cB 76 74 0.5135 0.5000 0.5135 2.49e-21 1ndd-a5-m1-cD_1ndd-a5-m1-cB
21 1ndd-a5-m1-cD 73 73 0.5000 0.5068 0.5068 1.45e-20 1ndd-a5-m1-cC_1ndd-a5-m1-cD, 1ndd-a5-m1-cD_1ndd-a5-m1-cA, 1ndd-a5-m1-cD_1ndd-a5-m1-cB
22 1ndd-a5-m1-cC 73 73 0.5000 0.5068 0.5068 1.45e-20 1ndd-a5-m1-cC_1ndd-a5-m1-cD
23 2wyq-a1-m2-cA 77 62 0.2838 0.2727 0.3387 4.18e-06 2wyq-a1-m1-cA_2wyq-a1-m2-cA
24 2wyq-a1-m1-cA 77 62 0.2838 0.2727 0.3387 4.18e-06 2wyq-a1-m1-cA_2wyq-a1-m2-cA
25 7mrj-a1-m1-cA 85 57 0.2162 0.1882 0.2807 0.006 7mrj-a1-m1-cB_7mrj-a1-m1-cA
26 7mrj-a1-m1-cB 75 57 0.2162 0.2133 0.2807 0.006 7mrj-a1-m1-cB_7mrj-a1-m1-cA
27 3qa8-a2-m1-cH 541 61 0.2568 0.0351 0.3115 0.013 3qa8-a2-m1-cH_3qa8-a2-m1-cE
28 3qa8-a2-m1-cF 622 61 0.2568 0.0305 0.3115 0.015 3qa8-a2-m1-cE_3qa8-a2-m1-cF
29 3qa8-a2-m1-cE 622 61 0.2568 0.0305 0.3115 0.015 3qa8-a2-m1-cE_3qa8-a2-m1-cF, 3qa8-a2-m1-cH_3qa8-a2-m1-cE
30 4kik-a1-m1-cA 618 62 0.2297 0.0275 0.2742 0.29 4kik-a1-m1-cA_4kik-a1-m1-cB
31 4kik-a1-m1-cB 648 62 0.2297 0.0262 0.2742 0.29 4kik-a1-m1-cA_4kik-a1-m1-cB
32 3uoe-a1-m1-cA 329 45 0.1622 0.0365 0.2667 1.9 3uoe-a1-m1-cB_3uoe-a1-m1-cA
33 3uoe-a1-m1-cB 310 45 0.1622 0.0387 0.2667 2.1 3uoe-a1-m1-cB_3uoe-a1-m1-cA
34 2d6f-a1-m1-cA 424 30 0.1892 0.0330 0.4667 2.8 2d6f-a1-m1-cA_2d6f-a1-m1-cB
35 2d6f-a1-m1-cB 424 30 0.1892 0.0330 0.4667 2.8 2d6f-a1-m1-cA_2d6f-a1-m1-cB
36 4e71-a1-m2-cA 90 72 0.3378 0.2778 0.3472 3.5 4e71-a1-m1-cA_4e71-a1-m2-cA
37 4e71-a1-m1-cA 90 72 0.3378 0.2778 0.3472 3.5 4e71-a1-m1-cA_4e71-a1-m2-cA
38 4e3c-a3-m1-cE 624 31 0.1486 0.0176 0.3548 4.2 4e3c-a3-m1-cD_4e3c-a3-m1-cE
39 4e3c-a3-m1-cD 624 31 0.1486 0.0176 0.3548 4.2 4e3c-a3-m1-cD_4e3c-a3-m1-cE
40 3j1b-a1-m1-cN 519 35 0.1622 0.0231 0.3429 8.1 3j1b-a1-m1-cH_3j1b-a1-m1-cN
41 3j1b-a1-m1-cL 519 35 0.1622 0.0231 0.3429 8.1 3j1b-a1-m1-cK_3j1b-a1-m1-cL
42 3j1b-a1-m1-cK 519 35 0.1622 0.0231 0.3429 8.1 3j1b-a1-m1-cK_3j1b-a1-m1-cL
43 3j1b-a1-m1-cH 519 35 0.1622 0.0231 0.3429 8.1 3j1b-a1-m1-cH_3j1b-a1-m1-cN
44 5u4n-a1-m2-cA 350 27 0.1486 0.0314 0.4074 9.4 5u4n-a1-m1-cA_5u4n-a1-m2-cA
45 5u4n-a1-m1-cA 350 27 0.1486 0.0314 0.4074 9.4 5u4n-a1-m1-cA_5u4n-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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