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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=96)
MQLAKVLGTVVSTSKTPNLTGVKLLLVQFLDTKGQPLERYEVAGDVVGAGLNEWVLVARG
SAARKERGNGDRPLDAMVVGIIDTVNVASGSLYNKR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2qw7-a2-m1-cJ 96 96 1.0000 1.0000 1.0000 4.31e-65 2qw7-a2-m1-cI_2qw7-a2-m1-cJ
2 2qw7-a2-m1-cI 96 96 1.0000 1.0000 1.0000 4.31e-65 2qw7-a2-m1-cI_2qw7-a2-m1-cJ
3 4jw0-a1-m1-cD 95 95 0.5938 0.6000 0.6000 2.27e-36 4jw0-a1-m1-cC_4jw0-a1-m1-cD
4 4jw0-a1-m1-cC 95 95 0.5938 0.6000 0.6000 2.27e-36 4jw0-a1-m1-cC_4jw0-a1-m1-cD
5 2z9h-a1-m1-cB 97 95 0.3854 0.3814 0.3895 1.87e-17 2z9h-a1-m1-cC_2z9h-a1-m1-cB
6 4i7a-a1-m1-cE 87 85 0.4479 0.4943 0.5059 1.43e-16 4i7a-a1-m1-cD_4i7a-a1-m1-cE
7 4i7a-a1-m1-cD 87 85 0.4479 0.4943 0.5059 1.43e-16 4i7a-a1-m1-cD_4i7a-a1-m1-cE
8 2hd3-a1-m1-cD 93 94 0.3646 0.3763 0.3723 5.80e-13 2hd3-a1-m1-cC_2hd3-a1-m1-cD
9 2z9h-a1-m1-cC 83 95 0.3542 0.4096 0.3579 4.60e-12 2z9h-a1-m1-cC_2z9h-a1-m1-cB
10 2rcf-a1-m1-cE 80 83 0.3229 0.3875 0.3735 1.37e-07 2rcf-a1-m1-cD_2rcf-a1-m1-cE
11 2rcf-a1-m1-cD 80 83 0.3229 0.3875 0.3735 1.37e-07 2rcf-a1-m1-cD_2rcf-a1-m1-cE
12 2hd3-a1-m1-cC 81 94 0.3333 0.3951 0.3404 5.10e-07 2hd3-a1-m1-cC_2hd3-a1-m1-cD
13 5l37-a1-m1-cE 78 83 0.2917 0.3590 0.3373 2.24e-05 5l37-a1-m1-cD_5l37-a1-m1-cE
14 5l37-a1-m1-cD 77 82 0.2812 0.3506 0.3293 2.14e-04 5l37-a1-m1-cD_5l37-a1-m1-cE
15 6jy5-a1-m1-cD 82 83 0.2604 0.3049 0.3012 7.99e-04 6jy5-a1-m1-cB_6jy5-a1-m1-cD
16 6jy5-a1-m1-cB 82 83 0.2604 0.3049 0.3012 7.99e-04 6jy5-a1-m1-cB_6jy5-a1-m1-cD
17 2zx0-a1-m1-cB 195 54 0.1667 0.0821 0.2963 1.2 2zx0-a1-m1-cA_2zx0-a1-m1-cB
18 2zx0-a1-m1-cA 195 54 0.1667 0.0821 0.2963 1.2 2zx0-a1-m1-cA_2zx0-a1-m1-cB
19 7nps-a1-m1-cP3 414 34 0.1354 0.0314 0.3824 6.6 7nps-a1-m1-cP2_7nps-a1-m1-cP3
20 7nps-a1-m1-cP2 414 34 0.1354 0.0314 0.3824 6.6 7nps-a1-m1-cP2_7nps-a1-m1-cP3

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Reference:
Jacob Schwartz et al.

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