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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=75)
MQLVLAGKYIGAGLASIGLVGAGIGIAIVFAALINGVSRNPALKGQLFTYSILGFALSEA
TGLFALMIAFLLLYA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5fl7-a1-m1-cP 75 75 1.0000 1.0000 1.0000 1.02e-44 5fl7-a1-m1-cP_5fl7-a1-m1-cQ
2 5fl7-a1-m1-cQ 76 75 1.0000 0.9868 1.0000 1.10e-44 5fl7-a1-m1-cP_5fl7-a1-m1-cQ
3 4f4s-a2-m3-cO 74 73 0.7467 0.7568 0.7671 1.23e-33 4f4s-a2-m3-cN_4f4s-a2-m3-cO
4 4f4s-a2-m3-cN 74 73 0.7467 0.7568 0.7671 1.23e-33 4f4s-a2-m3-cN_4f4s-a2-m3-cO
5 2wgm-a4-m1-cV 89 73 0.3867 0.3258 0.3973 8.43e-12 2wgm-a4-m1-cU_2wgm-a4-m1-cV
6 2wgm-a4-m1-cU 89 73 0.3867 0.3258 0.3973 8.43e-12 2wgm-a4-m1-cU_2wgm-a4-m1-cV
7 3zk2-a2-m1-cT 89 73 0.4000 0.3371 0.4110 3.51e-11 3zk2-a2-m1-cS_3zk2-a2-m1-cT
8 3zk2-a2-m1-cS 89 73 0.4000 0.3371 0.4110 3.51e-11 3zk2-a2-m1-cS_3zk2-a2-m1-cT
9 4bem-a1-m1-cI 81 75 0.3467 0.3210 0.3467 3.17e-07 4bem-a1-m1-cH_4bem-a1-m1-cI
10 4bem-a1-m1-cH 81 75 0.3467 0.3210 0.3467 3.17e-07 4bem-a1-m1-cH_4bem-a1-m1-cI
11 2x2v-a1-m1-cJ 68 43 0.2267 0.2500 0.3953 6.78e-05 2x2v-a1-m1-cI_2x2v-a1-m1-cJ
12 2x2v-a1-m1-cI 68 43 0.2267 0.2500 0.3953 6.78e-05 2x2v-a1-m1-cI_2x2v-a1-m1-cJ
13 2xqu-a1-m3-cE 81 59 0.2400 0.2222 0.3051 0.001 2xqu-a1-m3-cD_2xqu-a1-m3-cE
14 2xqu-a1-m3-cD 81 59 0.2400 0.2222 0.3051 0.001 2xqu-a1-m3-cD_2xqu-a1-m3-cE
15 1vlj-a1-m1-cB 400 42 0.1867 0.0350 0.3333 3.2 1vlj-a1-m1-cA_1vlj-a1-m1-cB
16 1vlj-a1-m1-cA 398 42 0.1867 0.0352 0.3333 3.5 1vlj-a1-m1-cA_1vlj-a1-m1-cB
17 2wds-a1-m3-cA 123 56 0.2667 0.1626 0.3571 8.9 2wds-a1-m2-cA_2wds-a1-m3-cA
18 2wds-a1-m2-cA 123 56 0.2667 0.1626 0.3571 8.9 2wds-a1-m2-cA_2wds-a1-m3-cA

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Reference:
Jacob Schwartz et al.

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