Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=66)
MQRGKVKWFNNEKGYGFIEVEGGSDVFVHFTAIQGEGFKTLEEGQEVSFEIVQGNRGPQA
ANVVKL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2hax-a1-m1-cB 66 66 1.0000 1.0000 1.0000 1.02e-42 2hax-a1-m1-cA_2hax-a1-m1-cB
2 2hax-a1-m1-cA 66 66 1.0000 1.0000 1.0000 1.02e-42 2hax-a1-m1-cA_2hax-a1-m1-cB
3 1c9o-a1-m1-cB 66 66 1.0000 1.0000 1.0000 1.02e-42 1c9o-a1-m1-cA_1c9o-a1-m1-cB
4 1c9o-a1-m1-cA 66 66 1.0000 1.0000 1.0000 1.02e-42 1c9o-a1-m1-cA_1c9o-a1-m1-cB
5 1hzb-a1-m1-cB 66 65 0.9848 0.9848 1.0000 6.04e-42 1hzb-a1-m1-cA_1hzb-a1-m1-cB
6 1hzb-a1-m1-cA 66 65 0.9848 0.9848 1.0000 6.04e-42 1hzb-a1-m1-cA_1hzb-a1-m1-cB
7 5jx4-a1-m1-cA 65 66 0.9697 0.9846 0.9697 1.80e-39 5jx4-a1-m1-cA_5jx4-a1-m1-cB
8 5jx4-a1-m1-cB 66 66 0.9697 0.9697 0.9697 2.25e-39 5jx4-a1-m1-cA_5jx4-a1-m1-cB
9 2i5m-a2-m2-cX 66 65 0.8182 0.8182 0.8308 5.00e-34 2i5m-a2-m1-cX_2i5m-a2-m2-cX
10 2i5m-a2-m1-cX 66 65 0.8182 0.8182 0.8308 5.00e-34 2i5m-a2-m1-cX_2i5m-a2-m2-cX
11 3i2z-a1-m1-cA 71 65 0.6515 0.6056 0.6615 2.61e-24 3i2z-a1-m1-cB_3i2z-a1-m1-cA
12 3i2z-a1-m1-cB 67 65 0.6515 0.6418 0.6615 3.68e-24 3i2z-a1-m1-cB_3i2z-a1-m1-cA
13 3cam-a1-m1-cB 65 61 0.5758 0.5846 0.6230 5.58e-20 3cam-a1-m1-cA_3cam-a1-m1-cB
14 3cam-a1-m1-cA 65 61 0.5758 0.5846 0.6230 5.58e-20 3cam-a1-m1-cA_3cam-a1-m1-cB
15 7f3i-a1-m1-cE 91 66 0.4242 0.3077 0.4242 3.52e-10 7f3i-a1-m1-cE_7f3i-a1-m1-cA
16 7f3i-a1-m1-cA 93 66 0.4242 0.3011 0.4242 3.60e-10 7f3i-a1-m1-cE_7f3i-a1-m1-cA
17 4alp-a1-m4-cD 84 69 0.3788 0.2976 0.3623 1.31e-08 4alp-a1-m4-cD_4alp-a1-m2-cB
18 4alp-a1-m2-cB 86 69 0.3788 0.2907 0.3623 1.40e-08 4alp-a1-m4-cD_4alp-a1-m2-cB
19 3ulj-a3-m2-cA 87 69 0.3788 0.2874 0.3623 1.51e-08 3ulj-a3-m2-cA_3ulj-a3-m2-cB
20 3ulj-a3-m1-cA 87 69 0.3788 0.2874 0.3623 1.51e-08 3ulj-a3-m1-cA_3ulj-a3-m2-cB
21 3ulj-a3-m2-cB 89 54 0.3485 0.2584 0.4259 2.09e-07 3ulj-a3-m1-cA_3ulj-a3-m2-cB, 3ulj-a3-m2-cA_3ulj-a3-m2-cB
22 2bh8-a1-m2-cA 85 30 0.3030 0.2353 0.6667 1.01e-06 2bh8-a1-m2-cA_2bh8-a1-m2-cB
23 2bh8-a1-m1-cA 85 30 0.3030 0.2353 0.6667 1.01e-06 2bh8-a1-m1-cA_2bh8-a1-m2-cB
24 2bh8-a1-m2-cB 86 30 0.3030 0.2326 0.6667 1.02e-06 2bh8-a1-m1-cA_2bh8-a1-m2-cB, 2bh8-a1-m1-cB_2bh8-a1-m2-cB, 2bh8-a1-m2-cA_2bh8-a1-m2-cB
25 2bh8-a1-m1-cB 86 30 0.3030 0.2326 0.6667 1.02e-06 2bh8-a1-m1-cB_2bh8-a1-m2-cB
26 3aqq-a1-m1-cD 98 65 0.3636 0.2449 0.3692 1.31e-06 3aqq-a1-m1-cC_3aqq-a1-m1-cD, 3aqq-a1-m1-cD_3aqq-a1-m1-cB
27 3aqq-a1-m1-cC 97 64 0.3636 0.2474 0.3750 2.48e-06 3aqq-a1-m1-cC_3aqq-a1-m1-cB, 3aqq-a1-m1-cC_3aqq-a1-m1-cD
28 3aqq-a1-m1-cB 99 66 0.3788 0.2525 0.3788 3.60e-06 3aqq-a1-m1-cC_3aqq-a1-m1-cB, 3aqq-a1-m1-cD_3aqq-a1-m1-cB
29 2o6x-a1-m2-cA 306 52 0.2424 0.0523 0.3077 1.0 2o6x-a1-m1-cA_2o6x-a1-m2-cA
30 2o6x-a1-m1-cA 306 52 0.2424 0.0523 0.3077 1.0 2o6x-a1-m1-cA_2o6x-a1-m2-cA
31 2cb1-a1-m4-cA 404 15 0.1667 0.0272 0.7333 1.1 2cb1-a1-m1-cA_2cb1-a1-m4-cA, 2cb1-a1-m2-cA_2cb1-a1-m4-cA, 2cb1-a1-m3-cA_2cb1-a1-m4-cA
32 2cb1-a1-m3-cA 404 15 0.1667 0.0272 0.7333 1.1 2cb1-a1-m3-cA_2cb1-a1-m4-cA
33 2cb1-a1-m2-cA 404 15 0.1667 0.0272 0.7333 1.1 2cb1-a1-m2-cA_2cb1-a1-m4-cA
34 2cb1-a1-m1-cA 404 15 0.1667 0.0272 0.7333 1.1 2cb1-a1-m1-cA_2cb1-a1-m4-cA
35 4ags-a1-m1-cA 430 45 0.2273 0.0349 0.3333 2.0 4ags-a1-m1-cA_4ags-a1-m1-cC
36 4ags-a1-m1-cC 430 45 0.2273 0.0349 0.3333 2.1 4ags-a1-m1-cA_4ags-a1-m1-cC
37 1yr0-a2-m1-cD 160 37 0.1667 0.0688 0.2973 6.2 1yr0-a2-m1-cC_1yr0-a2-m1-cD
38 1yr0-a2-m1-cC 160 37 0.1667 0.0688 0.2973 6.2 1yr0-a2-m1-cC_1yr0-a2-m1-cD

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600