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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=71)
MQVPFSRCCFSFAEQEIPLRAILCYRNTSSICSNEGLIFKLKRGKEACALDTVGWVQRHR
KMLRHCPSKRK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4oij-a1-m1-cB 71 71 1.0000 1.0000 1.0000 2.80e-49 4oij-a1-m1-cA_4oij-a1-m1-cB
2 4oij-a1-m1-cA 71 71 1.0000 1.0000 1.0000 2.80e-49 4oij-a1-m1-cA_4oij-a1-m1-cB
3 2q8r-a2-m1-cG 63 58 0.3099 0.3492 0.3793 3.62e-10 2q8r-a2-m1-cF_2q8r-a2-m1-cG
4 2q8r-a2-m1-cF 63 58 0.3099 0.3492 0.3793 3.62e-10 2q8r-a2-m1-cF_2q8r-a2-m1-cG
5 2ra4-a4-m4-cB 65 63 0.3662 0.4000 0.4127 5.74e-10 2ra4-a4-m2-cB_2ra4-a4-m4-cB
6 2ra4-a4-m2-cB 65 63 0.3662 0.4000 0.4127 5.74e-10 2ra4-a4-m2-cB_2ra4-a4-m4-cB
7 2ra4-a2-m4-cB 65 63 0.3662 0.4000 0.4127 5.74e-10 2ra4-a2-m4-cA_2ra4-a2-m4-cB
8 2ra4-a2-m4-cA 65 63 0.3662 0.4000 0.4127 5.74e-10 2ra4-a2-m4-cA_2ra4-a2-m4-cB
9 1ncv-a1-m1-cB 76 59 0.3662 0.3421 0.4407 4.82e-09 1ncv-a1-m1-cA_1ncv-a1-m1-cB
10 1ncv-a1-m1-cA 76 59 0.3662 0.3421 0.4407 4.82e-09 1ncv-a1-m1-cA_1ncv-a1-m1-cB
11 4mhe-a2-m1-cC 61 57 0.2817 0.3279 0.3509 5.49e-08 4mhe-a2-m1-cC_4mhe-a2-m1-cB
12 7s5a-a1-m1-cB 76 64 0.3239 0.3026 0.3594 7.01e-08 7s5a-a1-m1-cA_7s5a-a1-m1-cB
13 1esr-a1-m2-cA 75 64 0.3239 0.3067 0.3594 7.09e-08 1esr-a1-m1-cA_1esr-a1-m2-cA
14 1esr-a1-m1-cA 75 64 0.3239 0.3067 0.3594 7.09e-08 1esr-a1-m1-cA_1esr-a1-m2-cA
15 4mhe-a2-m1-cB 69 57 0.2817 0.2899 0.3509 7.16e-08 4mhe-a2-m1-cC_4mhe-a2-m1-cB
16 7s5a-a1-m1-cA 73 64 0.3239 0.3151 0.3594 7.82e-08 7s5a-a1-m1-cA_7s5a-a1-m1-cB
17 2fj2-a2-m1-cC 68 62 0.2676 0.2794 0.3065 8.24e-08 2fj2-a2-m1-cD_2fj2-a2-m1-cC
18 2fj2-a2-m1-cD 67 62 0.2676 0.2836 0.3065 8.70e-08 2fj2-a2-m1-cD_2fj2-a2-m1-cC
19 5yam-a1-m1-cB 69 57 0.2676 0.2754 0.3333 3.06e-06 5yam-a1-m1-cA_5yam-a1-m1-cB
20 5yam-a1-m1-cA 69 57 0.2676 0.2754 0.3333 3.06e-06 5yam-a1-m1-cA_5yam-a1-m1-cB
21 5ltl-a1-m1-cA 67 56 0.2676 0.2836 0.3393 1.03e-05 5ltl-a1-m1-cA_5ltl-a1-m1-cB
22 5ltl-a1-m1-cB 68 56 0.2676 0.2794 0.3393 1.08e-05 5ltl-a1-m1-cA_5ltl-a1-m1-cB
23 2vxw-a1-m1-cD 62 58 0.2535 0.2903 0.3103 1.62e-05 2vxw-a1-m1-cD_2vxw-a1-m1-cA, 2vxw-a1-m1-cD_2vxw-a1-m1-cB
24 2vxw-a1-m1-cB 69 58 0.2535 0.2609 0.3103 1.78e-05 2vxw-a1-m1-cD_2vxw-a1-m1-cB
25 2vxw-a1-m1-cA 69 58 0.2535 0.2609 0.3103 1.78e-05 2vxw-a1-m1-cD_2vxw-a1-m1-cA
26 2l9h-a1-m1-cC 67 56 0.2394 0.2537 0.3036 2.81e-05 2l9h-a1-m1-cA_2l9h-a1-m1-cC
27 2l9h-a1-m1-cA 67 56 0.2394 0.2537 0.3036 2.81e-05 2l9h-a1-m1-cA_2l9h-a1-m1-cC
28 1hrj-a1-m1-cB 68 56 0.2394 0.2500 0.3036 2.83e-05 1hrj-a1-m1-cA_1hrj-a1-m1-cB
29 1hrj-a1-m1-cA 68 56 0.2394 0.2500 0.3036 2.83e-05 1hrj-a1-m1-cA_1hrj-a1-m1-cB
30 6aez-a1-m3-cA 64 56 0.2394 0.2656 0.3036 3.17e-05 6aez-a1-m2-cA_6aez-a1-m3-cA
31 6aez-a1-m2-cA 64 56 0.2394 0.2656 0.3036 3.17e-05 6aez-a1-m2-cA_6aez-a1-m3-cA
32 5l2u-a2-m2-cI 65 56 0.2394 0.2615 0.3036 3.24e-05 5l2u-a2-m2-cG_5l2u-a2-m2-cI
33 5dnf-a1-m1-cG 65 56 0.2394 0.2615 0.3036 3.24e-05 5dnf-a1-m1-cE_5dnf-a1-m1-cG
34 5dnf-a1-m1-cE 65 56 0.2394 0.2615 0.3036 3.24e-05 5dnf-a1-m1-cE_5dnf-a1-m1-cG
35 5dnf-a1-m1-cD 65 56 0.2394 0.2615 0.3036 3.24e-05 5dnf-a1-m1-cA_5dnf-a1-m1-cD
36 5dnf-a1-m1-cA 65 56 0.2394 0.2615 0.3036 3.24e-05 5dnf-a1-m1-cA_5dnf-a1-m1-cD
37 5l2u-a2-m2-cH 64 56 0.2394 0.2656 0.3036 3.32e-05 5l2u-a2-m2-cG_5l2u-a2-m2-cH
38 5l2u-a2-m2-cG 64 56 0.2394 0.2656 0.3036 3.32e-05 5l2u-a2-m2-cG_5l2u-a2-m2-cH, 5l2u-a2-m2-cG_5l2u-a2-m2-cI
39 1nr4-a5-m1-cA 67 42 0.1831 0.1940 0.3095 0.003 1nr4-a5-m1-cA_1nr4-a5-m3-cE
40 1nr4-a5-m3-cF 66 42 0.1831 0.1970 0.3095 0.003 1nr4-a5-m3-cF_1nr4-a5-m3-cE
41 1nr4-a5-m4-cG 66 42 0.1831 0.1970 0.3095 0.003 1nr4-a5-m4-cG_1nr4-a5-m3-cE
42 5eki-a7-m1-cA 72 68 0.2817 0.2778 0.2941 0.003 5eki-a7-m1-cF_5eki-a7-m1-cA
43 5eki-a7-m1-cF 70 68 0.2817 0.2857 0.2941 0.003 5eki-a7-m1-cF_5eki-a7-m1-cA
44 1nr4-a5-m3-cE 69 42 0.1831 0.1884 0.3095 0.003 1nr4-a5-m1-cA_1nr4-a5-m3-cE, 1nr4-a5-m3-cF_1nr4-a5-m3-cE, 1nr4-a5-m4-cG_1nr4-a5-m3-cE
45 6log-a1-m2-cA 63 56 0.2254 0.2540 0.2857 0.004 6log-a1-m1-cA_6log-a1-m2-cA
46 6log-a1-m1-cA 63 56 0.2254 0.2540 0.2857 0.004 6log-a1-m1-cA_6log-a1-m2-cA
47 2jp1-a1-m1-cB 60 56 0.2676 0.3167 0.3393 0.009 2jp1-a1-m1-cA_2jp1-a1-m1-cB
48 2jp1-a1-m1-cA 60 56 0.2676 0.3167 0.3393 0.009 2jp1-a1-m1-cA_2jp1-a1-m1-cB
49 1qe6-a3-m2-cA 68 27 0.1690 0.1765 0.4444 0.21 1qe6-a3-m2-cA_1qe6-a3-m2-cB
50 1qe6-a3-m1-cD 72 27 0.1690 0.1667 0.4444 0.22 1qe6-a3-m2-cB_1qe6-a3-m1-cD
51 1qe6-a3-m2-cB 71 27 0.1690 0.1690 0.4444 0.24 1qe6-a3-m2-cA_1qe6-a3-m2-cB, 1qe6-a3-m2-cB_1qe6-a3-m1-cD
52 6pnz-a1-m1-cC 293 32 0.1549 0.0375 0.3438 6.9 6pnz-a1-m1-cB_6pnz-a1-m1-cC
53 6pnz-a1-m1-cB 293 32 0.1549 0.0375 0.3438 6.9 6pnz-a1-m1-cB_6pnz-a1-m1-cC

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Reference:
Jacob Schwartz et al.

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