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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=57)
MRELQDQLEAEQYFSTLYKTQVKELKEEIEEKNRENLKKIQELQNEKETLATQLDLA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5f5p-a2-m1-cF 58 57 1.0000 0.9828 1.0000 5.15e-33 5f5p-a2-m1-cE_5f5p-a2-m1-cF
2 5f5p-a2-m1-cE 57 57 1.0000 1.0000 1.0000 5.25e-33 5f5p-a2-m1-cE_5f5p-a2-m1-cF
3 5xep-a1-m1-cC 360 54 0.3333 0.0528 0.3519 2.2 5xep-a1-m1-cB_5xep-a1-m1-cC
4 5xep-a1-m1-cB 360 54 0.3333 0.0528 0.3519 2.2 5xep-a1-m1-cB_5xep-a1-m1-cC
5 2dq0-a1-m1-cB 447 29 0.2281 0.0291 0.4483 2.7 2dq0-a1-m1-cA_2dq0-a1-m1-cB
6 2dq0-a1-m1-cA 447 29 0.2281 0.0291 0.4483 2.7 2dq0-a1-m1-cA_2dq0-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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