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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=94)
MRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFDRHPDGVASVSF
RDPEEADYCIQTLDGRWFGGRQITAQAWDGTTDY

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6n3f-a1-m1-cA 95 94 1.0000 0.9895 1.0000 5.78e-68 6n3f-a1-m1-cC_6n3f-a1-m1-cA
2 6n3f-a1-m1-cC 94 94 1.0000 1.0000 1.0000 7.96e-68 6n3f-a1-m1-cC_6n3f-a1-m1-cA
3 3dxb-a5-m1-cE 210 92 0.2872 0.1286 0.2935 3.76e-09 3dxb-a5-m1-cE_3dxb-a5-m1-cG
4 6lur-a1-m1-cD 213 92 0.2872 0.1268 0.2935 3.89e-09 6lur-a1-m1-cA_6lur-a1-m1-cD
5 6lur-a1-m1-cA 211 92 0.2872 0.1280 0.2935 3.90e-09 6lur-a1-m1-cA_6lur-a1-m1-cD
6 3dxb-a5-m1-cG 211 92 0.2872 0.1280 0.2935 3.90e-09 3dxb-a5-m1-cB_3dxb-a5-m1-cG, 3dxb-a5-m1-cE_3dxb-a5-m1-cG, 3dxb-a5-m1-cG_3dxb-a5-m1-cD
7 3dxb-a5-m1-cF 211 92 0.2872 0.1280 0.2935 3.90e-09 3dxb-a5-m1-cF_3dxb-a5-m1-cA, 3dxb-a5-m1-cF_3dxb-a5-m1-cD
8 3dxb-a5-m1-cC 211 92 0.2872 0.1280 0.2935 3.90e-09 3dxb-a5-m1-cB_3dxb-a5-m1-cC
9 3dxb-a5-m1-cB 211 92 0.2872 0.1280 0.2935 3.90e-09 3dxb-a5-m1-cB_3dxb-a5-m1-cC, 3dxb-a5-m1-cB_3dxb-a5-m1-cG
10 3dxb-a5-m1-cA 214 92 0.2872 0.1262 0.2935 4.04e-09 3dxb-a5-m1-cA_3dxb-a5-m1-cD, 3dxb-a5-m1-cF_3dxb-a5-m1-cA
11 3dxb-a5-m1-cD 216 92 0.2872 0.1250 0.2935 4.28e-09 3dxb-a5-m1-cA_3dxb-a5-m1-cD, 3dxb-a5-m1-cF_3dxb-a5-m1-cD, 3dxb-a5-m1-cG_3dxb-a5-m1-cD
12 2peh-a3-m2-cB 104 94 0.3085 0.2788 0.3085 8.00e-06 2peh-a3-m1-cA_2peh-a3-m2-cB
13 2peh-a3-m1-cA 104 94 0.3085 0.2788 0.3085 8.00e-06 2peh-a3-m1-cA_2peh-a3-m2-cB
14 4oz1-a1-m1-cA 111 77 0.2553 0.2162 0.3117 1.97e-05 4oz1-a1-m1-cB_4oz1-a1-m1-cA
15 4oz1-a1-m1-cB 110 77 0.2553 0.2182 0.3117 2.07e-05 4oz1-a1-m1-cB_4oz1-a1-m1-cA
16 3bs9-a3-m1-cB 79 30 0.1489 0.1772 0.4667 0.011 3bs9-a3-m1-cA_3bs9-a3-m1-cB
17 3bs9-a3-m1-cA 79 30 0.1489 0.1772 0.4667 0.011 3bs9-a3-m1-cA_3bs9-a3-m1-cB
18 3b4d-a1-m2-cA 80 58 0.1915 0.2250 0.3103 0.59 3b4d-a1-m1-cA_3b4d-a1-m2-cA
19 3b4d-a1-m1-cA 80 58 0.1915 0.2250 0.3103 0.59 3b4d-a1-m1-cA_3b4d-a1-m2-cA
20 7b5h-a1-m1-cFD 1109 52 0.1809 0.0153 0.3269 0.69 7b5h-a1-m1-cED_7b5h-a1-m1-cFD
21 7b5h-a1-m1-cED 1109 52 0.1809 0.0153 0.3269 0.69 7b5h-a1-m1-cED_7b5h-a1-m1-cFD
22 3v4m-a2-m1-cB 101 72 0.2447 0.2277 0.3194 1.0 3v4m-a2-m1-cB_3v4m-a2-m1-cA
23 3v4m-a1-m2-cB 101 72 0.2447 0.2277 0.3194 1.0 3v4m-a1-m2-cB_3v4m-a1-m1-cA
24 3v4m-a2-m1-cA 102 72 0.2447 0.2255 0.3194 1.2 3v4m-a2-m1-cB_3v4m-a2-m1-cA
25 3v4m-a1-m2-cA 102 72 0.2447 0.2255 0.3194 1.2 3v4m-a1-m1-cA_3v4m-a1-m2-cA
26 3v4m-a1-m1-cA 102 72 0.2447 0.2255 0.3194 1.2 3v4m-a1-m1-cA_3v4m-a1-m2-cA, 3v4m-a1-m2-cB_3v4m-a1-m1-cA
27 1dwk-a1-m1-cJ 152 52 0.1596 0.0987 0.2885 1.3 1dwk-a1-m1-cA_1dwk-a1-m1-cJ, 1dwk-a1-m1-cD_1dwk-a1-m1-cJ, 1dwk-a1-m1-cH_1dwk-a1-m1-cJ, 1dwk-a1-m1-cI_1dwk-a1-m1-cJ
28 1dwk-a1-m1-cI 152 52 0.1596 0.0987 0.2885 1.3 1dwk-a1-m1-cI_1dwk-a1-m1-cJ
29 1dwk-a1-m1-cH 152 52 0.1596 0.0987 0.2885 1.3 1dwk-a1-m1-cH_1dwk-a1-m1-cJ
30 1dwk-a1-m1-cD 152 52 0.1596 0.0987 0.2885 1.3 1dwk-a1-m1-cD_1dwk-a1-m1-cJ
31 1dwk-a1-m1-cA 152 52 0.1596 0.0987 0.2885 1.3 1dwk-a1-m1-cA_1dwk-a1-m1-cJ
32 1gd2-a3-m1-cI 40 33 0.1064 0.2500 0.3030 4.1 1gd2-a3-m1-cJ_1gd2-a3-m1-cI
33 3na2-a4-m1-cC 125 38 0.1383 0.1040 0.3421 5.3 3na2-a4-m1-cC_3na2-a4-m1-cD
34 3na2-a2-m3-cC 125 38 0.1383 0.1040 0.3421 5.3 3na2-a2-m3-cC_3na2-a2-m1-cD
35 4q6j-a1-m2-cB 239 41 0.1489 0.0586 0.3415 5.3 4q6j-a1-m1-cA_4q6j-a1-m2-cB, 4q6j-a1-m1-cB_4q6j-a1-m2-cB, 4q6j-a1-m2-cA_4q6j-a1-m2-cB
36 4q6j-a1-m1-cB 239 41 0.1489 0.0586 0.3415 5.3 4q6j-a1-m1-cB_4q6j-a1-m2-cB
37 4q6j-a1-m2-cA 238 41 0.1489 0.0588 0.3415 5.5 4q6j-a1-m2-cA_4q6j-a1-m2-cB
38 4q6j-a1-m1-cA 238 41 0.1489 0.0588 0.3415 5.5 4q6j-a1-m1-cA_4q6j-a1-m2-cB
39 5kw6-a1-m1-cA 201 66 0.2021 0.0945 0.2879 7.1 5kw6-a1-m1-cB_5kw6-a1-m1-cA
40 5kw6-a1-m1-cB 198 66 0.2021 0.0960 0.2879 7.8 5kw6-a1-m1-cB_5kw6-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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