Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=93)
MRLEDLQEELKKDVFIDSTKLQYEAANNVMLYSKWLNKHSSIKKEMLRIEAQKKDTSLQY
WGILLDFCSGALDAIKSRGFAIKHIQDMRAFEA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4zws-a1-m1-cF 93 93 1.0000 1.0000 1.0000 3.62e-65 4zws-a1-m1-cF_4zws-a1-m1-cG
2 4zws-a1-m1-cC 99 99 1.0000 0.9394 0.9394 1.02e-62 4zws-a1-m1-cC_4zws-a1-m1-cB
3 4zws-a1-m1-cG 96 94 0.9892 0.9583 0.9787 3.02e-62 4zws-a1-m1-cF_4zws-a1-m1-cG
4 4zws-a1-m1-cB 116 115 1.0000 0.8017 0.8087 7.02e-60 4zws-a1-m1-cC_4zws-a1-m1-cB
5 6iz2-a2-m3-cB 144 36 0.1398 0.0903 0.3611 0.21 6iz2-a2-m1-cB_6iz2-a2-m3-cB
6 6iz2-a2-m1-cB 144 36 0.1398 0.0903 0.3611 0.21 6iz2-a2-m1-cB_6iz2-a2-m3-cB
7 3wid-a1-m1-cC 358 43 0.1183 0.0307 0.2558 2.9 3wid-a1-m1-cC_3wid-a1-m1-cD
8 3wid-a1-m1-cD 360 43 0.1183 0.0306 0.2558 2.9 3wid-a1-m1-cB_3wid-a1-m1-cD, 3wid-a1-m1-cC_3wid-a1-m1-cD
9 3wid-a1-m1-cB 360 43 0.1183 0.0306 0.2558 2.9 3wid-a1-m1-cB_3wid-a1-m1-cD
10 5frp-a1-m1-cA 677 60 0.1935 0.0266 0.3000 4.3 5frp-a1-m1-cB_5frp-a1-m1-cA
11 6n2n-a1-m1-cC 572 65 0.1505 0.0245 0.2154 5.6 6n2n-a1-m1-cA_6n2n-a1-m1-cC
12 6n2n-a1-m1-cA 572 65 0.1505 0.0245 0.2154 5.6 6n2n-a1-m1-cA_6n2n-a1-m1-cC
13 2axz-a3-m1-cD 299 54 0.2151 0.0669 0.3704 6.7 2axz-a3-m1-cD_2axz-a3-m1-cA
14 2axz-a3-m1-cA 300 54 0.2151 0.0667 0.3704 6.7 2axz-a3-m1-cD_2axz-a3-m1-cA
15 2grm-a1-m4-cA 315 54 0.2151 0.0635 0.3704 6.9 2grm-a1-m1-cA_2grm-a1-m4-cA
16 2grm-a1-m1-cA 315 54 0.2151 0.0635 0.3704 6.9 2grm-a1-m1-cA_2grm-a1-m4-cA
17 1z6o-a1-m1-cX 191 56 0.1613 0.0785 0.2679 9.0 1z6o-a1-m1-cV_1z6o-a1-m1-cX
18 1z6o-a1-m1-cV 191 56 0.1613 0.0785 0.2679 9.0 1z6o-a1-m1-cV_1z6o-a1-m1-cX
19 2h8o-a1-m2-cA 283 48 0.1505 0.0495 0.2917 9.8 2h8o-a1-m1-cA_2h8o-a1-m2-cA
20 2h8o-a1-m1-cA 283 48 0.1505 0.0495 0.2917 9.8 2h8o-a1-m1-cA_2h8o-a1-m2-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600