Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=95)
MRLEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPAD
VDPLTITSSLSSDGVLTVNGPRKQVSGPERTIPIT

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 3l1g-a1-m2-cA 95 95 1.0000 1.0000 1.0000 1.76e-65 3l1g-a1-m1-cA_3l1g-a1-m2-cA
2 3l1g-a1-m1-cA 95 95 1.0000 1.0000 1.0000 1.76e-65 3l1g-a1-m1-cA_3l1g-a1-m2-cA
3 3j07-a1-m1-cX 175 95 1.0000 0.5429 1.0000 1.83e-64 3j07-a1-m1-cG_3j07-a1-m1-cX, 3j07-a1-m1-cS_3j07-a1-m1-cX, 3j07-a1-m1-cW_3j07-a1-m1-cX
4 3j07-a1-m1-cW 175 95 1.0000 0.5429 1.0000 1.83e-64 3j07-a1-m1-cI_3j07-a1-m1-cW, 3j07-a1-m1-cW_3j07-a1-m1-cX
5 3j07-a1-m1-cS 175 95 1.0000 0.5429 1.0000 1.83e-64 3j07-a1-m1-cS_3j07-a1-m1-cX
6 3j07-a1-m1-cI 175 95 1.0000 0.5429 1.0000 1.83e-64 3j07-a1-m1-cI_3j07-a1-m1-cW
7 3j07-a1-m1-cG 175 95 1.0000 0.5429 1.0000 1.83e-64 3j07-a1-m1-cG_3j07-a1-m1-cX
8 2ygd-a1-m1-cX 175 95 1.0000 0.5429 1.0000 1.83e-64 2ygd-a1-m1-cU_2ygd-a1-m1-cX, 2ygd-a1-m1-cW_2ygd-a1-m1-cX
9 2ygd-a1-m1-cW 175 95 1.0000 0.5429 1.0000 1.83e-64 2ygd-a1-m1-cC_2ygd-a1-m1-cW, 2ygd-a1-m1-cW_2ygd-a1-m1-cX
10 2ygd-a1-m1-cV 175 95 1.0000 0.5429 1.0000 1.83e-64 2ygd-a1-m1-cF_2ygd-a1-m1-cV
11 2ygd-a1-m1-cU 175 95 1.0000 0.5429 1.0000 1.83e-64 2ygd-a1-m1-cF_2ygd-a1-m1-cU, 2ygd-a1-m1-cU_2ygd-a1-m1-cX
12 2ygd-a1-m1-cF 175 95 1.0000 0.5429 1.0000 1.83e-64 2ygd-a1-m1-cF_2ygd-a1-m1-cU, 2ygd-a1-m1-cF_2ygd-a1-m1-cV
13 2ygd-a1-m1-cC 175 95 1.0000 0.5429 1.0000 1.83e-64 2ygd-a1-m1-cC_2ygd-a1-m1-cW
14 2n0k-a1-m1-cB 89 85 0.8842 0.9438 0.9882 6.46e-57 2n0k-a1-m1-cA_2n0k-a1-m1-cB
15 2n0k-a1-m1-cA 89 85 0.8842 0.9438 0.9882 6.46e-57 2n0k-a1-m1-cA_2n0k-a1-m1-cB
16 4m5t-a3-m1-cG 86 85 0.8842 0.9767 0.9882 1.02e-56 4m5t-a3-m1-cC_4m5t-a3-m1-cG
17 6bp9-a1-m1-cB 89 85 0.8842 0.9438 0.9882 1.17e-56 6bp9-a1-m1-cA_6bp9-a1-m1-cB
18 6bp9-a1-m1-cA 89 85 0.8842 0.9438 0.9882 1.17e-56 6bp9-a1-m1-cA_6bp9-a1-m1-cB
19 4m5t-a3-m1-cE 85 84 0.8737 0.9765 0.9881 5.15e-56 4m5t-a3-m1-cC_4m5t-a3-m1-cE
20 2y1z-a1-m1-cA 85 84 0.8632 0.9647 0.9762 7.90e-56 2y1z-a1-m1-cA_2y1z-a1-m1-cB
21 2y1z-a1-m1-cB 87 83 0.8526 0.9310 0.9759 5.25e-55 2y1z-a1-m1-cA_2y1z-a1-m1-cB
22 4m5t-a3-m1-cC 85 85 0.8737 0.9765 0.9765 4.95e-54 4m5t-a3-m1-cA_4m5t-a3-m1-cC, 4m5t-a3-m1-cC_4m5t-a3-m1-cE, 4m5t-a3-m1-cC_4m5t-a3-m1-cG
23 4m5t-a3-m1-cA 82 85 0.8421 0.9756 0.9412 4.67e-51 4m5t-a3-m1-cA_4m5t-a3-m1-cC
24 2y1y-a1-m2-cA 77 78 0.8105 1.0000 0.9872 6.41e-50 2y1y-a1-m1-cA_2y1y-a1-m2-cA
25 2y1y-a1-m1-cA 77 78 0.8105 1.0000 0.9872 6.41e-50 2y1y-a1-m1-cA_2y1y-a1-m2-cA
26 3n3e-a1-m1-cA 106 98 0.5684 0.5094 0.5510 4.06e-36 3n3e-a1-m1-cB_3n3e-a1-m1-cA
27 3n3e-a1-m1-cB 104 98 0.5684 0.5192 0.5510 4.22e-36 3n3e-a1-m1-cB_3n3e-a1-m1-cA
28 6dv5-a1-m1-cJ 162 93 0.5474 0.3210 0.5591 2.16e-30 6dv5-a1-m1-cJ_6dv5-a1-m1-cK
29 6dv5-a1-m1-cK 175 94 0.5474 0.2971 0.5532 3.56e-30 6dv5-a1-m1-cJ_6dv5-a1-m1-cK
30 6dv5-a1-m1-cU 175 94 0.5474 0.2971 0.5532 4.87e-30 6dv5-a1-m1-cF_6dv5-a1-m1-cU
31 6dv5-a1-m1-cF 163 94 0.5474 0.3190 0.5532 5.02e-30 6dv5-a1-m1-cF_6dv5-a1-m1-cU
32 6dv5-a1-m1-cX 166 94 0.5474 0.3133 0.5532 5.38e-30 6dv5-a1-m1-cP_6dv5-a1-m1-cX
33 6dv5-a1-m1-cP 164 89 0.5368 0.3110 0.5730 1.84e-29 6dv5-a1-m1-cP_6dv5-a1-m1-cX
34 6f2r-a1-m1-cC 121 82 0.4000 0.3140 0.4634 3.75e-25 6f2r-a1-m1-cD_6f2r-a1-m1-cC
35 6f2r-a1-m1-cD 80 76 0.3789 0.4500 0.4737 5.01e-24 6f2r-a1-m1-cD_6f2r-a1-m1-cC
36 2bol-a1-m1-cB 290 66 0.2105 0.0690 0.3030 0.002 2bol-a1-m1-cB_2bol-a1-m1-cA
37 2bol-a1-m1-cB 290 74 0.2000 0.0655 0.2568 0.54 2bol-a1-m1-cB_2bol-a1-m1-cA
38 2bol-a1-m1-cA 301 66 0.2105 0.0664 0.3030 0.053 2bol-a1-m1-cB_2bol-a1-m1-cA
39 2bol-a1-m1-cA 301 74 0.2000 0.0631 0.2568 0.17 2bol-a1-m1-cB_2bol-a1-m1-cA
40 3sgr-a3-m3-cF 25 20 0.1368 0.5200 0.6500 1.6 3sgr-a3-m1-cC_3sgr-a3-m3-cF, 3sgr-a3-m3-cB_3sgr-a3-m3-cF, 3sgr-a3-m3-cE_3sgr-a3-m3-cF
41 3sgr-a3-m3-cE 25 20 0.1368 0.5200 0.6500 1.6 3sgr-a3-m3-cB_3sgr-a3-m3-cE, 3sgr-a3-m3-cE_3sgr-a3-m3-cF
42 3sgr-a3-m3-cB 25 20 0.1368 0.5200 0.6500 1.6 3sgr-a3-m1-cD_3sgr-a3-m3-cB, 3sgr-a3-m3-cB_3sgr-a3-m3-cE, 3sgr-a3-m3-cB_3sgr-a3-m3-cF
43 3sgr-a3-m1-cD 25 20 0.1368 0.5200 0.6500 1.6 3sgr-a3-m1-cD_3sgr-a3-m3-cB
44 3sgr-a2-m1-cE 25 20 0.1368 0.5200 0.6500 1.6 3sgr-a2-m1-cA_3sgr-a2-m1-cE
45 3sgr-a2-m1-cB 25 20 0.1368 0.5200 0.6500 1.6 3sgr-a2-m1-cA_3sgr-a2-m1-cB
46 3sgr-a2-m1-cA 25 20 0.1368 0.5200 0.6500 1.6 3sgr-a2-m1-cA_3sgr-a2-m1-cB, 3sgr-a2-m1-cA_3sgr-a2-m1-cE
47 3sgr-a3-m1-cC 24 20 0.1368 0.5417 0.6500 1.7 3sgr-a3-m1-cC_3sgr-a3-m3-cF
48 3msu-a1-m1-cA 415 27 0.0842 0.0193 0.2963 6.8 3msu-a1-m1-cA_3msu-a1-m1-cB
49 3cu7-a3-m1-cA 1625 81 0.2737 0.0160 0.3210 7.2 3cu7-a3-m1-cB_3cu7-a3-m1-cA
50 3msu-a1-m1-cB 426 27 0.0842 0.0188 0.2963 7.5 3msu-a1-m1-cA_3msu-a1-m1-cB
51 3cu7-a3-m1-cB 1481 81 0.2737 0.0176 0.3210 8.0 3cu7-a3-m1-cB_3cu7-a3-m1-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600