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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=96)
MRLTEEEVQALLEKADGWKLADERWIVKKYRFQDYLQGIEFVRRIAAISENANHHPFISI
DYKLITVKLSSWRAKGLTKLDFDLAKQYDEVYNQMK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2ebb-a1-m2-cA 96 96 1.0000 1.0000 1.0000 7.81e-68 2ebb-a1-m1-cA_2ebb-a1-m2-cA
2 2ebb-a1-m1-cA 96 96 1.0000 1.0000 1.0000 7.81e-68 2ebb-a1-m1-cA_2ebb-a1-m2-cA
3 1usm-a1-m2-cA 77 64 0.1979 0.2468 0.2969 4.25e-10 1usm-a1-m1-cA_1usm-a1-m2-cA
4 1usm-a1-m1-cA 77 64 0.1979 0.2468 0.2969 4.25e-10 1usm-a1-m1-cA_1usm-a1-m2-cA
5 4wil-a1-m2-cB 98 87 0.3438 0.3367 0.3793 1.52e-09 4wil-a1-m1-cB_4wil-a1-m2-cB, 4wil-a1-m2-cB_4wil-a1-m1-cA, 4wil-a1-m2-cB_4wil-a1-m2-cA
6 4wil-a1-m1-cB 98 87 0.3438 0.3367 0.3793 1.52e-09 4wil-a1-m1-cB_4wil-a1-m2-cB
7 4wil-a1-m2-cA 100 87 0.3438 0.3300 0.3793 1.58e-09 4wil-a1-m2-cB_4wil-a1-m2-cA
8 4wil-a1-m1-cA 100 87 0.3438 0.3300 0.3793 1.58e-09 4wil-a1-m2-cB_4wil-a1-m1-cA
9 2v6u-a1-m2-cB 99 75 0.2812 0.2727 0.3600 7.88e-09 2v6u-a1-m2-cB_2v6u-a1-m1-cA, 2v6u-a1-m2-cB_2v6u-a1-m2-cA
10 2v6u-a1-m2-cA 103 75 0.2812 0.2621 0.3600 8.56e-09 2v6u-a1-m2-cB_2v6u-a1-m2-cA
11 2v6u-a1-m1-cA 103 75 0.2812 0.2621 0.3600 8.56e-09 2v6u-a1-m2-cB_2v6u-a1-m1-cA
12 2v6t-a1-m2-cB 100 75 0.2812 0.2700 0.3600 8.86e-09 2v6t-a1-m1-cB_2v6t-a1-m2-cB
13 2v6t-a1-m1-cB 100 75 0.2812 0.2700 0.3600 8.86e-09 2v6t-a1-m1-cB_2v6t-a1-m2-cB
14 2q9s-a2-m3-cA 131 77 0.2292 0.1679 0.2857 0.35 2q9s-a2-m1-cA_2q9s-a2-m3-cA
15 2q9s-a2-m1-cA 131 77 0.2292 0.1679 0.2857 0.35 2q9s-a2-m1-cA_2q9s-a2-m3-cA
16 2q9s-a1-m2-cA 131 77 0.2292 0.1679 0.2857 0.35 2q9s-a1-m1-cA_2q9s-a1-m2-cA
17 2q9s-a1-m1-cA 131 77 0.2292 0.1679 0.2857 0.35 2q9s-a1-m1-cA_2q9s-a1-m2-cA
18 1lif-a1-m2-cA 131 77 0.2292 0.1679 0.2857 0.35 1lif-a1-m1-cA_1lif-a1-m2-cA
19 1lif-a1-m1-cA 131 77 0.2292 0.1679 0.2857 0.35 1lif-a1-m1-cA_1lif-a1-m2-cA
20 1a18-a1-m2-cA 130 77 0.2292 0.1692 0.2857 0.37 1a18-a1-m1-cA_1a18-a1-m2-cA
21 1a18-a1-m1-cA 130 77 0.2292 0.1692 0.2857 0.37 1a18-a1-m1-cA_1a18-a1-m2-cA
22 4low-a1-m1-cA 84 31 0.1146 0.1310 0.3548 0.37 4low-a1-m1-cB_4low-a1-m1-cA
23 4low-a1-m1-cB 79 45 0.1354 0.1646 0.2889 0.87 4low-a1-m1-cB_4low-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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