Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=96)
MRLTEEEVQALLEKADGWKLADERWIVKKYRFQDYLQGIEFVRRIAAISENANHHPFISI
DYKLITVKLSSWRAKGLTKLDFDLAKQYDEVYNQMK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2ebb-a1-m2-cA 96 96 1.0000 1.0000 1.0000 7.81e-68 2ebb-a1-m1-cA_2ebb-a1-m2-cA
2 2ebb-a1-m1-cA 96 96 1.0000 1.0000 1.0000 7.81e-68 2ebb-a1-m1-cA_2ebb-a1-m2-cA
3 1usm-a1-m2-cA 77 64 0.1979 0.2468 0.2969 4.25e-10 1usm-a1-m1-cA_1usm-a1-m2-cA
4 1usm-a1-m1-cA 77 64 0.1979 0.2468 0.2969 4.25e-10 1usm-a1-m1-cA_1usm-a1-m2-cA
5 4wil-a1-m2-cB 98 87 0.3438 0.3367 0.3793 1.52e-09 4wil-a1-m1-cB_4wil-a1-m2-cB, 4wil-a1-m2-cB_4wil-a1-m1-cA, 4wil-a1-m2-cB_4wil-a1-m2-cA
6 4wil-a1-m1-cB 98 87 0.3438 0.3367 0.3793 1.52e-09 4wil-a1-m1-cB_4wil-a1-m2-cB
7 4wil-a1-m2-cA 100 87 0.3438 0.3300 0.3793 1.58e-09 4wil-a1-m2-cB_4wil-a1-m2-cA
8 4wil-a1-m1-cA 100 87 0.3438 0.3300 0.3793 1.58e-09 4wil-a1-m2-cB_4wil-a1-m1-cA
9 2v6u-a1-m2-cB 99 75 0.2812 0.2727 0.3600 7.88e-09 2v6u-a1-m2-cB_2v6u-a1-m1-cA, 2v6u-a1-m2-cB_2v6u-a1-m2-cA
10 2v6u-a1-m2-cA 103 75 0.2812 0.2621 0.3600 8.56e-09 2v6u-a1-m2-cB_2v6u-a1-m2-cA
11 2v6u-a1-m1-cA 103 75 0.2812 0.2621 0.3600 8.56e-09 2v6u-a1-m2-cB_2v6u-a1-m1-cA
12 2v6t-a1-m2-cB 100 75 0.2812 0.2700 0.3600 8.86e-09 2v6t-a1-m1-cB_2v6t-a1-m2-cB
13 2v6t-a1-m1-cB 100 75 0.2812 0.2700 0.3600 8.86e-09 2v6t-a1-m1-cB_2v6t-a1-m2-cB
14 2q9s-a2-m3-cA 131 77 0.2292 0.1679 0.2857 0.35 2q9s-a2-m1-cA_2q9s-a2-m3-cA
15 2q9s-a2-m1-cA 131 77 0.2292 0.1679 0.2857 0.35 2q9s-a2-m1-cA_2q9s-a2-m3-cA
16 2q9s-a1-m2-cA 131 77 0.2292 0.1679 0.2857 0.35 2q9s-a1-m1-cA_2q9s-a1-m2-cA
17 2q9s-a1-m1-cA 131 77 0.2292 0.1679 0.2857 0.35 2q9s-a1-m1-cA_2q9s-a1-m2-cA
18 1lif-a1-m2-cA 131 77 0.2292 0.1679 0.2857 0.35 1lif-a1-m1-cA_1lif-a1-m2-cA
19 1lif-a1-m1-cA 131 77 0.2292 0.1679 0.2857 0.35 1lif-a1-m1-cA_1lif-a1-m2-cA
20 1a18-a1-m2-cA 130 77 0.2292 0.1692 0.2857 0.37 1a18-a1-m1-cA_1a18-a1-m2-cA
21 1a18-a1-m1-cA 130 77 0.2292 0.1692 0.2857 0.37 1a18-a1-m1-cA_1a18-a1-m2-cA
22 4low-a1-m1-cA 84 31 0.1146 0.1310 0.3548 0.37 4low-a1-m1-cB_4low-a1-m1-cA
23 4low-a1-m1-cB 79 45 0.1354 0.1646 0.2889 0.87 4low-a1-m1-cB_4low-a1-m1-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600