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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=94)
MRPIHPGEILREEFQKEMGFSAAALARALGVATPTVNNILRERGGVSADMALRLSICLDT
TPEFWLNLQTAFDLRTAEQQHGDEIIGSVQRLVA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6f8h-a2-m1-cB 94 94 1.0000 1.0000 1.0000 4.29e-66 6f8h-a2-m3-cC_6f8h-a2-m1-cB
2 6f8h-a2-m3-cC 93 92 0.9787 0.9892 1.0000 1.17e-64 6f8h-a2-m3-cC_6f8h-a2-m1-cB
3 6lb3-a3-m1-cD 92 92 0.5426 0.5543 0.5543 5.48e-32 6lb3-a3-m1-cD_6lb3-a3-m1-cC
4 6lb3-a3-m1-cC 93 92 0.5426 0.5484 0.5543 6.95e-32 6lb3-a3-m1-cD_6lb3-a3-m1-cC
5 3trb-a2-m1-cA 89 87 0.4574 0.4831 0.4943 7.87e-19 3trb-a2-m1-cA_3trb-a2-m1-cB
6 3trb-a2-m1-cB 90 87 0.4574 0.4778 0.4943 9.52e-19 3trb-a2-m1-cA_3trb-a2-m1-cB
7 3trb-a1-m2-cB 90 87 0.4574 0.4778 0.4943 9.52e-19 3trb-a1-m1-cB_3trb-a1-m2-cB
8 3trb-a1-m1-cB 90 87 0.4574 0.4778 0.4943 9.52e-19 3trb-a1-m1-cB_3trb-a1-m2-cB
9 4mcx-a1-m1-cA 93 76 0.2979 0.3011 0.3684 4.59e-14 4mcx-a1-m1-cC_4mcx-a1-m1-cA
10 4mcx-a1-m1-cC 92 76 0.2979 0.3043 0.3684 4.68e-14 4mcx-a1-m1-cC_4mcx-a1-m1-cA
11 2eby-a1-m1-cB 98 79 0.2979 0.2857 0.3544 1.10e-11 2eby-a1-m1-cB_2eby-a1-m1-cA
12 2eby-a1-m1-cA 102 79 0.2979 0.2745 0.3544 1.45e-11 2eby-a1-m1-cB_2eby-a1-m1-cA
13 2ict-a2-m2-cA 89 75 0.2660 0.2809 0.3333 1.82e-05 2ict-a2-m1-cA_2ict-a2-m2-cA
14 2ict-a2-m1-cA 89 75 0.2660 0.2809 0.3333 1.82e-05 2ict-a2-m1-cA_2ict-a2-m2-cA
15 1b0n-a6-m3-cA 103 30 0.1170 0.1068 0.3667 1.5 1b0n-a6-m1-cA_1b0n-a6-m3-cA
16 1b0n-a6-m1-cA 103 30 0.1170 0.1068 0.3667 1.5 1b0n-a6-m1-cA_1b0n-a6-m3-cA
17 1b0n-a5-m2-cA 103 30 0.1170 0.1068 0.3667 1.5 1b0n-a5-m1-cA_1b0n-a5-m2-cA
18 1b0n-a5-m1-cA 103 30 0.1170 0.1068 0.3667 1.5 1b0n-a5-m1-cA_1b0n-a5-m2-cA
19 3zkc-a1-m1-cB 63 30 0.1170 0.1746 0.3667 1.6 3zkc-a1-m1-cA_3zkc-a1-m1-cB
20 3zkc-a1-m1-cA 61 30 0.1170 0.1803 0.3667 1.6 3zkc-a1-m1-cA_3zkc-a1-m1-cB
21 7nfc-a1-m1-cA 3562 40 0.1383 0.0036 0.3250 3.5 7nfc-a1-m1-cF_7nfc-a1-m1-cA
22 7nfc-a1-m1-cF 3557 40 0.1383 0.0037 0.3250 3.5 7nfc-a1-m1-cF_7nfc-a1-m1-cA
23 2w48-a1-m1-cC 299 79 0.2660 0.0836 0.3165 3.9 2w48-a1-m1-cC_2w48-a1-m1-cD
24 2w48-a1-m1-cD 308 79 0.2340 0.0714 0.2785 5.1 2w48-a1-m1-cA_2w48-a1-m1-cD, 2w48-a1-m1-cC_2w48-a1-m1-cD
25 2w48-a1-m1-cA 308 66 0.2128 0.0649 0.3030 6.1 2w48-a1-m1-cA_2w48-a1-m1-cD
26 4p9f-a1-m1-cB 195 85 0.2340 0.1128 0.2588 7.6 4p9f-a1-m1-cB_4p9f-a1-m1-cA
27 4p9f-a1-m1-cA 204 85 0.2340 0.1078 0.2588 9.0 4p9f-a1-m1-cB_4p9f-a1-m1-cA
28 4isb-a1-m1-cB 494 98 0.2553 0.0486 0.2449 9.9 4isb-a1-m1-cB_4isb-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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