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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=82)
MRPPFTYATLIRWAILEAPEKQRTLNEIYHWFTRMFAFFRNHPATWKNAIRHNLSLHKCF
VRVESEKGAVWTVDELEFRKKR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3qrf-a2-m1-cI 82 82 1.0000 1.0000 1.0000 9.82e-58 3qrf-a2-m1-cH_3qrf-a2-m1-cI
2 3qrf-a2-m1-cH 82 82 1.0000 1.0000 1.0000 9.82e-58 3qrf-a2-m1-cH_3qrf-a2-m1-cI
3 2a07-a1-m1-cI 81 81 0.7317 0.7407 0.7407 7.54e-43 2a07-a1-m1-cH_2a07-a1-m1-cI
4 6xat-a2-m2-cA 77 75 0.7317 0.7792 0.8000 7.43e-42 6xat-a2-m1-cA_6xat-a2-m2-cA
5 6xat-a2-m1-cA 77 75 0.7317 0.7792 0.8000 7.43e-42 6xat-a2-m1-cA_6xat-a2-m2-cA
6 2a07-a1-m1-cH 79 79 0.7195 0.7468 0.7468 1.09e-41 2a07-a1-m1-cH_2a07-a1-m1-cI
7 7vox-a2-m1-cB 83 77 0.4024 0.3976 0.4286 3.70e-20 7vox-a2-m1-cB_7vox-a2-m1-cH
8 7vox-a2-m1-cH 85 77 0.4024 0.3882 0.4286 3.86e-20 7vox-a2-m1-cB_7vox-a2-m1-cH
9 7fj2-a2-m1-cE 79 75 0.4146 0.4304 0.4533 4.98e-16 7fj2-a2-m1-cE_7fj2-a2-m1-cF
10 7fj2-a2-m1-cF 80 75 0.4146 0.4250 0.4533 5.11e-16 7fj2-a2-m1-cE_7fj2-a2-m1-cF
11 5ic8-a6-m1-cB 282 27 0.1585 0.0461 0.4815 0.85 5ic8-a6-m1-cC_5ic8-a6-m1-cB
12 3pxp-a5-m2-cC 278 42 0.1585 0.0468 0.3095 1.9 3pxp-a5-m1-cC_3pxp-a5-m2-cC
13 3pxp-a5-m1-cC 278 42 0.1585 0.0468 0.3095 1.9 3pxp-a5-m1-cC_3pxp-a5-m2-cC
14 5b13-a1-m1-cF 164 32 0.1707 0.0854 0.4375 5.9 5b13-a1-m1-cA_5b13-a1-m1-cF, 5b13-a1-m1-cE_5b13-a1-m1-cF
15 5b13-a1-m1-cE 164 32 0.1707 0.0854 0.4375 5.9 5b13-a1-m1-cE_5b13-a1-m1-cF
16 5b13-a1-m1-cA 164 32 0.1707 0.0854 0.4375 5.9 5b13-a1-m1-cA_5b13-a1-m1-cF

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Reference:
Jacob Schwartz et al.

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