HomodimerDB

Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB

>protein (length=92)
MRQFKVSHPGEMIARDLEDMGVSGRRFAHNIGVTPATVSRLLAGKTALTPSLSIRIAAAL
GSTPEFWLRLQSNYDLRQLENQIDTSGIVLYG

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Dimers
1	4mcx-a1-m1-cA	93	92	1.0000	0.9892	1.0000	7.17e-65	4mcx-a1-m1-cC_4mcx-a1-m1-cA
2	4mcx-a1-m1-cC	92	92	1.0000	1.0000	1.0000	7.35e-65	4mcx-a1-m1-cC_4mcx-a1-m1-cA
3	2ict-a2-m2-cA	89	84	0.3804	0.3933	0.4167	8.37e-15	2ict-a2-m1-cA_2ict-a2-m2-cA
4	2ict-a2-m1-cA	89	84	0.3804	0.3933	0.4167	8.37e-15	2ict-a2-m1-cA_2ict-a2-m2-cA
5	6f8h-a2-m1-cB	94	76	0.3043	0.2979	0.3684	4.58e-14	6f8h-a2-m3-cC_6f8h-a2-m1-cB
6	6f8h-a2-m3-cC	93	76	0.3043	0.3011	0.3684	4.88e-14	6f8h-a2-m3-cC_6f8h-a2-m1-cB
7	3trb-a2-m1-cA	89	74	0.2826	0.2921	0.3514	1.63e-13	3trb-a2-m1-cA_3trb-a2-m1-cB
8	3trb-a2-m1-cB	90	73	0.2826	0.2889	0.3562	1.78e-13	3trb-a2-m1-cA_3trb-a2-m1-cB
9	3trb-a1-m2-cB	90	73	0.2826	0.2889	0.3562	1.78e-13	3trb-a1-m1-cB_3trb-a1-m2-cB
10	3trb-a1-m1-cB	90	73	0.2826	0.2889	0.3562	1.78e-13	3trb-a1-m1-cB_3trb-a1-m2-cB
11	2eby-a1-m1-cB	98	83	0.2717	0.2551	0.3012	2.51e-07	2eby-a1-m1-cB_2eby-a1-m1-cA
12	2eby-a1-m1-cA	102	83	0.2717	0.2451	0.3012	3.22e-07	2eby-a1-m1-cB_2eby-a1-m1-cA
13	6lb3-a3-m1-cD	92	87	0.2609	0.2609	0.2759	1.86e-06	6lb3-a3-m1-cD_6lb3-a3-m1-cC
14	6lb3-a3-m1-cC	93	87	0.2609	0.2581	0.2759	2.07e-06	6lb3-a3-m1-cD_6lb3-a3-m1-cC
15	5ttx-a3-m1-cC	148	43	0.1739	0.1081	0.3721	0.44	5ttx-a3-m1-cC_5ttx-a3-m1-cB
16	5ttx-a1-m2-cC	148	43	0.1739	0.1081	0.3721	0.44	5ttx-a1-m2-cC_5ttx-a1-m1-cA
17	5ttx-a3-m1-cB	151	43	0.1739	0.1060	0.3721	0.50	5ttx-a3-m1-cC_5ttx-a3-m1-cB
18	5ttx-a1-m1-cA	151	43	0.1739	0.1060	0.3721	0.50	5ttx-a1-m2-cC_5ttx-a1-m1-cA
19	6af4-a2-m1-cD	92	45	0.1304	0.1304	0.2667	0.62	6af4-a2-m1-cF_6af4-a2-m1-cD
20	6af4-a2-m1-cF	91	45	0.1304	0.1319	0.2667	0.65	6af4-a2-m1-cF_6af4-a2-m1-cD
21	2m89-a1-m1-cB	134	71	0.2065	0.1418	0.2676	1.8	2m89-a1-m1-cA_2m89-a1-m1-cB
22	2m89-a1-m1-cA	134	71	0.2065	0.1418	0.2676	1.8	2m89-a1-m1-cA_2m89-a1-m1-cB
23	2hk3-a1-m1-cB	331	35	0.1413	0.0393	0.3714	2.7	2hk3-a1-m1-cA_2hk3-a1-m1-cB
24	2hk3-a1-m1-cA	331	35	0.1413	0.0393	0.3714	2.7	2hk3-a1-m1-cA_2hk3-a1-m1-cB
25	3f51-a3-m1-cF	93	45	0.1522	0.1505	0.3111	5.2	3f51-a3-m1-cD_3f51-a3-m1-cF
26	1rpe-a1-m1-cR	63	50	0.1522	0.2222	0.2800	5.4	1rpe-a1-m1-cL_1rpe-a1-m1-cR
27	1rpe-a1-m1-cL	63	50	0.1522	0.2222	0.2800	5.4	1rpe-a1-m1-cL_1rpe-a1-m1-cR
28	3f51-a3-m1-cD	93	45	0.1522	0.1505	0.3111	5.5	3f51-a3-m1-cD_3f51-a3-m1-cF
29	1yox-a2-m1-cE	198	27	0.1196	0.0556	0.4074	5.9	1yox-a2-m1-cE_1yox-a2-m1-cD
30	1yox-a2-m1-cD	204	27	0.1196	0.0539	0.4074	6.4	1yox-a2-m1-cE_1yox-a2-m1-cD
31	4ham-a1-m2-cA	133	19	0.1196	0.0827	0.5789	7.7	4ham-a1-m1-cA_4ham-a1-m2-cA
32	4ham-a1-m1-cA	133	19	0.1196	0.0827	0.5789	7.7	4ham-a1-m1-cA_4ham-a1-m2-cA
33	5fyd-a1-m1-cB	252	44	0.1522	0.0556	0.3182	9.3	5fyd-a1-m1-cB_5fyd-a1-m1-cA

[Back]

Reference:
Jacob Schwartz et al.