Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=60)
MRRMANNARERLRVRDINEAFKELGRMVQLHLKSDKPQTKLLILHQAVAVILSLEQQVRE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6od5-a1-m1-cB 60 60 1.0000 1.0000 1.0000 8.38e-38 6od5-a1-m1-cB_6od5-a1-m1-cA
2 6od5-a1-m1-cA 62 60 1.0000 0.9677 1.0000 1.20e-37 6od5-a1-m1-cB_6od5-a1-m1-cA
3 6od3-a4-m1-cI 59 58 0.9667 0.9831 1.0000 3.17e-36 6od3-a4-m1-cJ_6od3-a4-m1-cI
4 6od3-a4-m1-cJ 52 51 0.8500 0.9808 1.0000 1.15e-30 6od3-a4-m1-cJ_6od3-a4-m1-cI
5 3u5v-a1-m2-cA 62 54 0.7333 0.7097 0.8148 5.69e-24 3u5v-a1-m1-cA_3u5v-a1-m2-cA
6 3u5v-a1-m1-cA 62 54 0.7333 0.7097 0.8148 5.69e-24 3u5v-a1-m1-cA_3u5v-a1-m2-cA
7 7z5k-a1-m1-cA 56 55 0.3333 0.3571 0.3636 0.009 7z5k-a1-m1-cA_7z5k-a1-m1-cB
8 7z5k-a1-m1-cB 56 55 0.3333 0.3571 0.3636 0.010 7z5k-a1-m1-cA_7z5k-a1-m1-cB
9 2ql2-a3-m1-cB 59 59 0.3500 0.3559 0.3559 0.028 2ql2-a3-m1-cD_2ql2-a3-m1-cB
10 2ql2-a3-m1-cD 57 58 0.3500 0.3684 0.3621 0.031 2ql2-a3-m1-cD_2ql2-a3-m1-cB
11 4rk6-a1-m1-cA 261 28 0.2000 0.0460 0.4286 0.031 4rk6-a1-m1-cB_4rk6-a1-m1-cA
12 1mdy-a2-m1-cD 62 59 0.3500 0.3387 0.3559 0.073 1mdy-a2-m1-cC_1mdy-a2-m1-cD
13 1mdy-a2-m1-cC 62 59 0.3500 0.3387 0.3559 0.073 1mdy-a2-m1-cC_1mdy-a2-m1-cD
14 1q3i-a2-m3-cA 192 40 0.2000 0.0625 0.3000 0.41 1q3i-a2-m2-cA_1q3i-a2-m3-cA
15 1q3i-a2-m2-cA 192 40 0.2000 0.0625 0.3000 0.41 1q3i-a2-m2-cA_1q3i-a2-m3-cA
16 6fx5-a1-m1-cB 74 45 0.2333 0.1892 0.3111 3.1 6fx5-a1-m1-cA_6fx5-a1-m1-cB
17 6fx5-a1-m1-cA 72 44 0.2333 0.1944 0.3182 5.1 6fx5-a1-m1-cA_6fx5-a1-m1-cB
18 7obz-a2-m1-cC 175 45 0.2333 0.0800 0.3111 7.6 7obz-a2-m1-cB_7obz-a2-m1-cC
19 7obz-a2-m1-cB 175 45 0.2333 0.0800 0.3111 7.6 7obz-a2-m1-cB_7obz-a2-m1-cC
20 7qpg-a1-m1-cS 2208 40 0.2500 0.0068 0.3750 8.7 7qpg-a1-m1-cR_7qpg-a1-m1-cS
21 7qpg-a1-m1-cR 2208 40 0.2500 0.0068 0.3750 8.7 7qpg-a1-m1-cR_7qpg-a1-m1-cS
22 1ep0-a1-m2-cA 183 36 0.2333 0.0765 0.3889 9.5 1ep0-a1-m1-cA_1ep0-a1-m2-cA
23 1ep0-a1-m1-cA 183 36 0.2333 0.0765 0.3889 9.5 1ep0-a1-m1-cA_1ep0-a1-m2-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600