Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=93)
MRVIVFFDLPVITPENRHNYSVFRKYLIKSGFIMQQKSVYSKLVLNLTNRDSIVKSIEKN
KPPEGLVEVLTVTEKQYAKMEIIIGESKTEYLN

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 6jhz-a1-m1-cA 93 93 1.0000 1.0000 1.0000 9.14e-64 6jhz-a1-m1-cB_6jhz-a1-m1-cA
2 6jhz-a1-m1-cB 91 91 0.9785 1.0000 1.0000 5.76e-62 6jhz-a1-m1-cB_6jhz-a1-m1-cA
3 6qxt-a1-m1-cx 103 87 0.4516 0.4078 0.4828 6.46e-25 6qxt-a1-m1-cw_6qxt-a1-m1-cx
4 6qxt-a1-m1-cw 103 87 0.4516 0.4078 0.4828 6.46e-25 6qxt-a1-m1-cw_6qxt-a1-m1-cx
5 5zyf-a1-m1-cA 88 86 0.4301 0.4545 0.4651 3.57e-24 5zyf-a1-m1-cB_5zyf-a1-m1-cA
6 5zyf-a1-m1-cB 87 86 0.4301 0.4598 0.4651 3.92e-24 5zyf-a1-m1-cB_5zyf-a1-m1-cA
7 5xvo-a3-m1-cM 104 93 0.4301 0.3846 0.4301 5.41e-24 5xvo-a3-m1-cM_5xvo-a3-m1-cN
8 5xvo-a3-m1-cN 105 93 0.4301 0.3810 0.4301 6.07e-24 5xvo-a3-m1-cM_5xvo-a3-m1-cN
9 7umz-a1-m1-cD 3927 81 0.2366 0.0056 0.2716 1.1 7umz-a1-m1-cC_7umz-a1-m1-cD
10 7umz-a1-m1-cC 3927 81 0.2366 0.0056 0.2716 1.1 7umz-a1-m1-cC_7umz-a1-m1-cD
11 7k0t-a1-m1-cD 4105 81 0.2366 0.0054 0.2716 1.2 7k0t-a1-m1-cC_7k0t-a1-m1-cD
12 7k0t-a1-m1-cC 4105 81 0.2366 0.0054 0.2716 1.2 7k0t-a1-m1-cC_7k0t-a1-m1-cD
13 6foo-a1-m1-cD 4168 81 0.2366 0.0053 0.2716 1.2 6foo-a1-m1-cC_6foo-a1-m1-cD
14 6foo-a1-m1-cC 4168 81 0.2366 0.0053 0.2716 1.2 6foo-a1-m1-cC_6foo-a1-m1-cD
15 7tdj-a1-m1-cD 4133 81 0.2366 0.0053 0.2716 1.2 7tdj-a1-m1-cC_7tdj-a1-m1-cD
16 7tdj-a1-m1-cC 4133 81 0.2366 0.0053 0.2716 1.2 7tdj-a1-m1-cC_7tdj-a1-m1-cD
17 6wot-a1-m1-cD 4197 81 0.2366 0.0052 0.2716 1.3 6wot-a1-m1-cB_6wot-a1-m1-cD, 6wot-a1-m1-cC_6wot-a1-m1-cD
18 6wot-a1-m1-cC 4197 81 0.2366 0.0052 0.2716 1.3 6wot-a1-m1-cC_6wot-a1-m1-cD
19 6wot-a1-m1-cB 4197 81 0.2366 0.0052 0.2716 1.3 6wot-a1-m1-cB_6wot-a1-m1-cD
20 7t64-a1-m1-cD 4247 81 0.2366 0.0052 0.2716 1.4 7t64-a1-m1-cC_7t64-a1-m1-cD
21 7t64-a1-m1-cC 4247 81 0.2366 0.0052 0.2716 1.4 7t64-a1-m1-cC_7t64-a1-m1-cD
22 7m6l-a1-m1-cI 4299 81 0.2366 0.0051 0.2716 1.4 7m6l-a1-m1-cG_7m6l-a1-m1-cI
23 7m6l-a1-m1-cG 4299 81 0.2366 0.0051 0.2716 1.4 7m6l-a1-m1-cG_7m6l-a1-m1-cI
24 7m6a-a1-m1-cI 4306 81 0.2366 0.0051 0.2716 1.4 7m6a-a1-m1-cG_7m6a-a1-m1-cI
25 7m6a-a1-m1-cG 4306 81 0.2366 0.0051 0.2716 1.4 7m6a-a1-m1-cG_7m6a-a1-m1-cI
26 5hla-a1-m2-cA 697 36 0.0968 0.0129 0.2500 8.2 5hla-a1-m1-cA_5hla-a1-m2-cA
27 5hla-a1-m1-cA 697 36 0.0968 0.0129 0.2500 8.2 5hla-a1-m1-cA_5hla-a1-m2-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600