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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=75)
MSDIVYMGNKALYLILIFSLWPVGIATVIGLSIGLLLPFGIKLIGVSISLLLLSGWYGEV
LLSFCHEIMFLIKSG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 8axk-a1-m1-cH 75 75 1.0000 1.0000 1.0000 6.66e-46 8axk-a1-m1-cI_8axk-a1-m1-cH
2 6r6b-a1-m1-cI 85 85 1.0000 0.8824 0.8824 2.04e-43 6r6b-a1-m1-cH_6r6b-a1-m1-cI
3 6r6b-a1-m1-cH 85 85 1.0000 0.8824 0.8824 2.04e-43 6r6b-a1-m1-cH_6r6b-a1-m1-cI
4 8axk-a1-m1-cJ 67 75 0.8933 1.0000 0.8933 1.71e-38 8axk-a1-m1-cI_8axk-a1-m1-cJ
5 8axk-a1-m1-cI 63 75 0.8400 1.0000 0.8400 4.36e-35 8axk-a1-m1-cI_8axk-a1-m1-cH, 8axk-a1-m1-cI_8axk-a1-m1-cJ
6 7agx-a1-m1-c1G 73 70 0.6000 0.6164 0.6429 4.14e-26 7agx-a1-m1-c1G_7agx-a1-m1-c1H
7 6q16-a1-m1-c7 84 81 0.6133 0.5476 0.5679 4.63e-24 6q16-a1-m1-c6_6q16-a1-m1-c7
8 7agx-a1-m1-c1H 83 80 0.6000 0.5422 0.5625 2.93e-23 7agx-a1-m1-c1G_7agx-a1-m1-c1H
9 6q16-a1-m1-c6 53 71 0.4267 0.6038 0.4507 2.20e-12 6q16-a1-m1-c6_6q16-a1-m1-c7
10 5k6a-a1-m1-cD 247 47 0.2133 0.0648 0.3404 2.4 5k6a-a1-m1-cC_5k6a-a1-m1-cD
11 5jdc-a1-m1-cD 247 47 0.2133 0.0648 0.3404 2.4 5jdc-a1-m1-cB_5jdc-a1-m1-cD
12 3jqf-a1-m1-cC 247 47 0.2133 0.0648 0.3404 2.4 3jqf-a1-m1-cC_3jqf-a1-m1-cD
13 3jq7-a1-m1-cD 247 47 0.2133 0.0648 0.3404 2.4 3jq7-a1-m1-cA_3jq7-a1-m1-cD
14 3jq7-a1-m1-cA 247 47 0.2133 0.0648 0.3404 2.4 3jq7-a1-m1-cA_3jq7-a1-m1-cD, 3jq7-a1-m1-cC_3jq7-a1-m1-cA
15 6gd4-a1-m1-cB 249 47 0.2133 0.0643 0.3404 2.4 6gd4-a1-m1-cA_6gd4-a1-m1-cB
16 6gd4-a1-m1-cA 249 47 0.2133 0.0643 0.3404 2.4 6gd4-a1-m1-cA_6gd4-a1-m1-cB
17 3jqf-a1-m1-cD 249 47 0.2133 0.0643 0.3404 2.4 3jqf-a1-m1-cC_3jqf-a1-m1-cD
18 2x9v-a1-m1-cD 250 47 0.2133 0.0640 0.3404 2.4 2x9v-a1-m1-cA_2x9v-a1-m1-cD
19 2x9v-a1-m1-cA 250 47 0.2133 0.0640 0.3404 2.4 2x9v-a1-m1-cA_2x9v-a1-m1-cD
20 3bmo-a1-m1-cC 252 47 0.2133 0.0635 0.3404 2.4 3bmo-a1-m1-cC_3bmo-a1-m1-cA
21 3bmo-a1-m1-cA 255 47 0.2133 0.0627 0.3404 2.4 3bmo-a1-m1-cC_3bmo-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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