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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=85)
MSDIVYMGNKALYLILIFSLWPVGIATVIGLSIGLLQTVTQLQEQTLPFGIKLIGVSISL
LLLSGWYGEVLLSFCHEIMFLIKSG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6r6b-a1-m1-cI 85 85 1.0000 1.0000 1.0000 7.27e-55 6r6b-a1-m1-cH_6r6b-a1-m1-cI
2 6r6b-a1-m1-cH 85 85 1.0000 1.0000 1.0000 7.27e-55 6r6b-a1-m1-cH_6r6b-a1-m1-cI
3 8axk-a1-m1-cH 75 85 0.8824 1.0000 0.8824 2.32e-43 8axk-a1-m1-cI_8axk-a1-m1-cH
4 8axk-a1-m1-cJ 67 85 0.7882 1.0000 0.7882 1.31e-37 8axk-a1-m1-cI_8axk-a1-m1-cJ
5 6q16-a1-m1-c7 84 81 0.6588 0.6667 0.6914 2.53e-35 6q16-a1-m1-c6_6q16-a1-m1-c7
6 7agx-a1-m1-c1H 83 80 0.6471 0.6627 0.6875 1.85e-34 7agx-a1-m1-c1G_7agx-a1-m1-c1H
7 8axk-a1-m1-cI 63 85 0.7412 1.0000 0.7412 3.56e-34 8axk-a1-m1-cI_8axk-a1-m1-cH, 8axk-a1-m1-cI_8axk-a1-m1-cJ
8 7agx-a1-m1-c1G 73 80 0.5294 0.6164 0.5625 4.14e-23 7agx-a1-m1-c1G_7agx-a1-m1-c1H
9 6q16-a1-m1-c6 53 81 0.3765 0.6038 0.3951 7.86e-11 6q16-a1-m1-c6_6q16-a1-m1-c7
10 6s3l-a1-m1-cI 89 74 0.2471 0.2360 0.2838 5.43e-04 6s3l-a1-m1-cH_6s3l-a1-m1-cI
11 6s3l-a1-m1-cH 89 74 0.2471 0.2360 0.2838 5.43e-04 6s3l-a1-m1-cH_6s3l-a1-m1-cI
12 6s3r-a1-m1-cJ 89 45 0.1529 0.1461 0.2889 0.041 6s3r-a1-m1-cI_6s3r-a1-m1-cJ
13 6s3r-a1-m1-cI 89 45 0.1529 0.1461 0.2889 0.041 6s3r-a1-m1-cI_6s3r-a1-m1-cJ
14 4jbb-a1-m2-cA 208 27 0.1294 0.0529 0.4074 0.64 4jbb-a1-m1-cA_4jbb-a1-m2-cA
15 4jbb-a1-m1-cA 208 27 0.1294 0.0529 0.4074 0.64 4jbb-a1-m1-cA_4jbb-a1-m2-cA
16 6u7j-a1-m1-cD 569 56 0.2118 0.0316 0.3214 7.6 6u7j-a1-m1-cA_6u7j-a1-m1-cD, 6u7j-a1-m1-cC_6u7j-a1-m1-cD, 6u7j-a1-m1-cD_6u7j-a1-m1-cB
17 6u7j-a1-m1-cC 569 56 0.2118 0.0316 0.3214 7.6 6u7j-a1-m1-cC_6u7j-a1-m1-cD
18 6u7j-a1-m1-cA 569 56 0.2118 0.0316 0.3214 7.6 6u7j-a1-m1-cA_6u7j-a1-m1-cD
19 6u7j-a1-m1-cB 570 56 0.2118 0.0316 0.3214 7.6 6u7j-a1-m1-cD_6u7j-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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