Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=84)
MSDNIRRSMPLFPIGIVMQLTELSARQIRYYEENGLIFPARTEGNRRLFSFHDVDKLLEI
KHLIEQGVNMAGIKQILAKAEAEP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4r4e-a1-m1-cB 84 84 1.0000 1.0000 1.0000 2.21e-58 4r4e-a1-m1-cA_4r4e-a1-m1-cB
2 4r4e-a1-m1-cA 83 83 0.9881 1.0000 1.0000 2.25e-57 4r4e-a1-m1-cA_4r4e-a1-m1-cB
3 7tec-a1-m2-cA 72 69 0.5595 0.6528 0.6812 1.53e-30 7tec-a1-m1-cA_7tec-a1-m2-cA
4 7tec-a1-m1-cA 72 69 0.5595 0.6528 0.6812 1.53e-30 7tec-a1-m1-cA_7tec-a1-m2-cA
5 7tea-a2-m1-cC 76 73 0.4881 0.5395 0.5616 6.15e-25 7tea-a2-m1-cA_7tea-a2-m1-cC
6 7tea-a2-m1-cA 76 72 0.4881 0.5395 0.5694 7.24e-25 7tea-a2-m1-cA_7tea-a2-m1-cC
7 4r24-a1-m2-cB 85 75 0.4286 0.4235 0.4800 8.61e-19 4r24-a1-m1-cB_4r24-a1-m2-cB
8 4r24-a1-m1-cB 85 75 0.4286 0.4235 0.4800 8.61e-19 4r24-a1-m1-cB_4r24-a1-m2-cB
9 4wls-a1-m1-cB 108 57 0.2143 0.1667 0.3158 1.11e-05 4wls-a1-m1-cA_4wls-a1-m1-cB
10 4wls-a1-m1-cA 108 57 0.2143 0.1667 0.3158 1.11e-05 4wls-a1-m1-cA_4wls-a1-m1-cB
11 3qao-a1-m2-cA 136 62 0.2619 0.1618 0.3548 9.23e-05 3qao-a1-m1-cA_3qao-a1-m2-cA
12 3qao-a1-m1-cA 136 62 0.2619 0.1618 0.3548 9.23e-05 3qao-a1-m1-cA_3qao-a1-m2-cA
13 6jgw-a1-m1-cB 116 67 0.2500 0.1810 0.3134 1.27e-04 6jgw-a1-m1-cB_6jgw-a1-m1-cA
14 6jni-a2-m1-cC 128 65 0.2500 0.1641 0.3231 1.32e-04 6jni-a2-m1-cC_6jni-a2-m1-cD
15 6jgw-a1-m1-cA 125 67 0.2500 0.1680 0.3134 1.52e-04 6jgw-a1-m1-cB_6jgw-a1-m1-cA
16 6jni-a2-m1-cD 145 67 0.2500 0.1448 0.3134 2.06e-04 6jni-a2-m1-cC_6jni-a2-m1-cD
17 5gpe-a4-m1-cG 129 68 0.2500 0.1628 0.3088 2.80e-04 5gpe-a4-m1-cH_5gpe-a4-m1-cG
18 5gpe-a4-m1-cH 128 68 0.2500 0.1641 0.3088 2.91e-04 5gpe-a4-m1-cH_5gpe-a4-m1-cG
19 1q06-a1-m1-cA 122 58 0.2143 0.1475 0.3103 5.02e-04 1q06-a1-m1-cA_1q06-a1-m1-cB
20 1q06-a1-m1-cB 126 58 0.2143 0.1429 0.3103 5.15e-04 1q06-a1-m1-cA_1q06-a1-m1-cB
21 3hh0-a1-m1-cB 128 64 0.2143 0.1406 0.2812 0.009 3hh0-a1-m1-cD_3hh0-a1-m1-cB
22 3hh0-a1-m1-cD 127 64 0.2143 0.1417 0.2812 0.009 3hh0-a1-m1-cC_3hh0-a1-m1-cD, 3hh0-a1-m1-cD_3hh0-a1-m1-cA, 3hh0-a1-m1-cD_3hh0-a1-m1-cB
23 3hh0-a1-m1-cC 127 64 0.2143 0.1417 0.2812 0.009 3hh0-a1-m1-cC_3hh0-a1-m1-cD
24 3hh0-a1-m1-cA 131 64 0.2143 0.1374 0.2812 0.011 3hh0-a1-m1-cD_3hh0-a1-m1-cA
25 2vz4-a1-m2-cA 100 50 0.1667 0.1400 0.2800 0.014 2vz4-a1-m1-cA_2vz4-a1-m2-cA
26 2vz4-a1-m1-cA 100 50 0.1667 0.1400 0.2800 0.014 2vz4-a1-m1-cA_2vz4-a1-m2-cA
27 7xn2-a1-m2-cA 148 55 0.1905 0.1081 0.2909 0.050 7xn2-a1-m1-cA_7xn2-a1-m2-cA
28 7xn2-a1-m1-cA 148 55 0.1905 0.1081 0.2909 0.050 7xn2-a1-m1-cA_7xn2-a1-m2-cA
29 1r8d-a1-m1-cB 107 67 0.2262 0.1776 0.2836 0.066 1r8d-a1-m1-cB_1r8d-a1-m1-cA
30 1r8d-a1-m1-cA 109 67 0.2262 0.1743 0.2836 0.069 1r8d-a1-m1-cB_1r8d-a1-m1-cA
31 3gpv-a1-m1-cA 108 74 0.3095 0.2407 0.3514 0.13 3gpv-a1-m1-cA_3gpv-a1-m1-cB
32 3gpv-a1-m1-cB 111 74 0.3095 0.2342 0.3514 0.14 3gpv-a1-m1-cA_3gpv-a1-m1-cB
33 3gp4-a2-m3-cA 132 57 0.2381 0.1515 0.3509 0.15 3gp4-a2-m3-cB_3gp4-a2-m3-cA
34 3gp4-a2-m3-cB 130 57 0.2381 0.1538 0.3509 0.15 3gp4-a2-m2-cB_3gp4-a2-m3-cB, 3gp4-a2-m3-cB_3gp4-a2-m3-cA
35 3gp4-a2-m2-cB 130 57 0.2381 0.1538 0.3509 0.15 3gp4-a2-m2-cB_3gp4-a2-m3-cB
36 4ua1-a1-m1-cB 125 67 0.2619 0.1760 0.3284 0.60 4ua1-a1-m1-cA_4ua1-a1-m1-cB
37 4ua1-a1-m1-cA 124 67 0.2738 0.1855 0.3433 0.87 4ua1-a1-m1-cA_4ua1-a1-m1-cB
38 2zhg-a1-m2-cA 121 66 0.2143 0.1488 0.2727 1.2 2zhg-a1-m1-cA_2zhg-a1-m2-cA
39 2zhg-a1-m1-cA 121 66 0.2143 0.1488 0.2727 1.2 2zhg-a1-m1-cA_2zhg-a1-m2-cA
40 6xlk-a1-m1-cH 268 66 0.1786 0.0560 0.2273 1.5 6xlk-a1-m1-cG_6xlk-a1-m1-cH
41 6xlk-a1-m1-cG 268 66 0.1786 0.0560 0.2273 1.5 6xlk-a1-m1-cG_6xlk-a1-m1-cH
42 7cla-a1-m2-cA 139 56 0.1429 0.0863 0.2143 6.8 7cla-a1-m1-cA_7cla-a1-m2-cA
43 7cla-a1-m1-cA 139 56 0.1429 0.0863 0.2143 6.8 7cla-a1-m1-cA_7cla-a1-m2-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600