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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=71)
MSEGAEELKAKLKKLNAQATALKMDLHDLAEDLPTGWNRIMEVAEKTYEAYRQLDEFRKS
TASLEHHHHHH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2js5-a1-m1-cB 71 71 1.0000 1.0000 1.0000 1.86e-47 2js5-a1-m1-cA_2js5-a1-m1-cB
2 2js5-a1-m1-cA 71 71 1.0000 1.0000 1.0000 1.86e-47 2js5-a1-m1-cA_2js5-a1-m1-cB
3 3csx-a2-m1-cB 71 58 0.4366 0.4366 0.5345 2.80e-17 3csx-a2-m2-cA_3csx-a2-m1-cB
4 3csx-a1-m1-cB 71 58 0.4366 0.4366 0.5345 2.80e-17 3csx-a1-m1-cA_3csx-a1-m1-cB
5 3csx-a2-m2-cA 61 53 0.4225 0.4918 0.5660 9.16e-17 3csx-a2-m2-cA_3csx-a2-m1-cB
6 3csx-a1-m1-cA 61 53 0.4225 0.4918 0.5660 9.16e-17 3csx-a1-m1-cA_3csx-a1-m1-cB
7 1ja9-a1-m4-cA 259 30 0.1972 0.0541 0.4667 0.061 1ja9-a1-m1-cA_1ja9-a1-m4-cA, 1ja9-a1-m2-cA_1ja9-a1-m4-cA, 1ja9-a1-m3-cA_1ja9-a1-m4-cA
8 1ja9-a1-m3-cA 259 30 0.1972 0.0541 0.4667 0.061 1ja9-a1-m3-cA_1ja9-a1-m4-cA
9 1ja9-a1-m2-cA 259 30 0.1972 0.0541 0.4667 0.061 1ja9-a1-m2-cA_1ja9-a1-m4-cA
10 1ja9-a1-m1-cA 259 30 0.1972 0.0541 0.4667 0.061 1ja9-a1-m1-cA_1ja9-a1-m4-cA
11 6a9p-a2-m1-cC 104 53 0.2394 0.1635 0.3208 1.4 6a9p-a2-m1-cE_6a9p-a2-m1-cC
12 8bvb-a1-m3-cC 289 38 0.2113 0.0519 0.3947 1.4 8bvb-a1-m1-cA_8bvb-a1-m3-cC, 8bvb-a1-m1-cB_8bvb-a1-m3-cC
13 8bvb-a1-m1-cB 289 38 0.2113 0.0519 0.3947 1.4 8bvb-a1-m1-cB_8bvb-a1-m3-cC
14 8bvb-a1-m1-cA 289 38 0.2113 0.0519 0.3947 1.4 8bvb-a1-m1-cA_8bvb-a1-m3-cC
15 6a9p-a1-m1-cH 101 53 0.2394 0.1683 0.3208 1.4 6a9p-a1-m1-cH_6a9p-a1-m1-cA
16 6a9p-a2-m1-cF 100 53 0.2394 0.1700 0.3208 1.7 6a9p-a2-m1-cF_6a9p-a2-m1-cE
17 6a9p-a1-m1-cA 103 53 0.2394 0.1650 0.3208 1.7 6a9p-a1-m1-cH_6a9p-a1-m1-cA
18 6a9p-a2-m1-cE 102 53 0.2394 0.1667 0.3208 1.7 6a9p-a2-m1-cE_6a9p-a2-m1-cC, 6a9p-a2-m1-cF_6a9p-a2-m1-cE
19 4ney-a1-m1-cA 163 15 0.1408 0.0613 0.6667 1.8 4ney-a1-m1-cA_4ney-a1-m1-cB
20 4ic6-a1-m2-cC 335 9 0.1127 0.0239 0.8889 2.5 4ic6-a1-m2-cC_4ic6-a1-m2-cA
21 4ic6-a1-m2-cA 340 9 0.1127 0.0235 0.8889 2.5 4ic6-a1-m2-cC_4ic6-a1-m2-cA
22 4ic6-a1-m1-cA 340 9 0.1127 0.0235 0.8889 2.5 4ic6-a1-m2-cB_4ic6-a1-m1-cA
23 7zpf-a2-m1-cB 452 46 0.2394 0.0376 0.3696 3.5 7zpf-a2-m2-cD_7zpf-a2-m1-cB
24 2fic-a1-m1-cA 191 68 0.2817 0.1047 0.2941 3.6 2fic-a1-m1-cA_2fic-a1-m2-cB
25 2pzb-a2-m1-cD 250 65 0.3099 0.0880 0.3385 3.8 2pzb-a2-m1-cC_2pzb-a2-m1-cD
26 3b83-a1-m8-cG 99 30 0.1408 0.1010 0.3333 3.9 3b83-a1-m2-cA_3b83-a1-m8-cG, 3b83-a1-m2-cE_3b83-a1-m8-cG
27 3b83-a1-m4-cE 99 30 0.1408 0.1010 0.3333 3.9 3b83-a1-m1-cC_3b83-a1-m4-cE, 3b83-a1-m4-cC_3b83-a1-m4-cE, 3b83-a1-m4-cF_3b83-a1-m4-cE
28 3b83-a1-m4-cC 99 30 0.1408 0.1010 0.3333 3.9 3b83-a1-m4-cC_3b83-a1-m4-cE
29 3b83-a1-m2-cE 99 30 0.1408 0.1010 0.3333 3.9 3b83-a1-m2-cE_3b83-a1-m8-cG
30 3b83-a1-m1-cC 99 30 0.1408 0.1010 0.3333 3.9 3b83-a1-m1-cC_3b83-a1-m4-cE
31 6z68-a1-m1-cA 363 29 0.1831 0.0358 0.4483 4.3 6z68-a1-m1-cB_6z68-a1-m1-cA
32 3nqw-a1-m1-cB 178 60 0.3099 0.1236 0.3667 4.5 3nqw-a1-m1-cA_3nqw-a1-m1-cB
33 3nqw-a1-m1-cA 178 60 0.3099 0.1236 0.3667 4.5 3nqw-a1-m1-cA_3nqw-a1-m1-cB
34 4jvh-a2-m3-cA 168 43 0.1408 0.0595 0.2326 4.8 4jvh-a2-m1-cA_4jvh-a2-m3-cA
35 4jvh-a2-m1-cA 168 43 0.1408 0.0595 0.2326 4.8 4jvh-a2-m1-cA_4jvh-a2-m3-cA
36 4jvh-a1-m2-cA 168 43 0.1408 0.0595 0.2326 4.8 4jvh-a1-m1-cA_4jvh-a1-m2-cA
37 4jvh-a1-m1-cA 168 43 0.1408 0.0595 0.2326 4.8 4jvh-a1-m1-cA_4jvh-a1-m2-cA
38 3edm-a1-m1-cD 213 30 0.1831 0.0610 0.4333 5.4 3edm-a1-m1-cD_3edm-a1-m1-cA, 3edm-a1-m1-cD_3edm-a1-m1-cB
39 2fic-a1-m2-cB 201 60 0.2535 0.0896 0.3000 5.5 2fic-a1-m1-cA_2fic-a1-m2-cB
40 7eb9-a1-m1-cB 54 20 0.1549 0.2037 0.5500 6.1 7eb9-a1-m1-cB_7eb9-a1-m1-cC
41 5wuy-a1-m1-cB 279 35 0.1549 0.0394 0.3143 6.5 5wuy-a1-m1-cA_5wuy-a1-m1-cB
42 5wuy-a1-m1-cA 279 35 0.1549 0.0394 0.3143 6.5 5wuy-a1-m1-cA_5wuy-a1-m1-cB
43 1yb2-a1-m2-cA 219 43 0.1690 0.0548 0.2791 7.5 1yb2-a1-m1-cA_1yb2-a1-m2-cA
44 1yb2-a1-m1-cA 219 43 0.1690 0.0548 0.2791 7.5 1yb2-a1-m1-cA_1yb2-a1-m2-cA
45 6yvr-a1-m1-cBBB 470 42 0.2535 0.0383 0.4286 8.5 6yvr-a1-m1-cAAA_6yvr-a1-m1-cBBB
46 6yvr-a1-m1-cAAA 470 42 0.2535 0.0383 0.4286 8.5 6yvr-a1-m1-cAAA_6yvr-a1-m1-cBBB
47 4kaf-a2-m1-cA 289 27 0.1549 0.0381 0.4074 8.5 4kaf-a2-m1-cA_4kaf-a2-m1-cB
48 4kaf-a2-m1-cB 291 27 0.1549 0.0378 0.4074 8.5 4kaf-a2-m1-cA_4kaf-a2-m1-cB
49 4cuk-a1-m1-cC 335 32 0.1408 0.0299 0.3125 9.4 4cuk-a1-m1-cA_4cuk-a1-m1-cC

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Reference:
Jacob Schwartz et al.

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