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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=80)
MSELFSVPYFIENLKQHIEMNQSEDKIHAMNSYYRSVVSTLVQDQLTKNAVVLKRIQHLD
EAYNKVKRGESKLEHHHHHH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2js1-a1-m1-cB 80 80 1.0000 1.0000 1.0000 1.13e-54 2js1-a1-m1-cA_2js1-a1-m1-cB
2 2js1-a1-m1-cA 80 80 1.0000 1.0000 1.0000 1.13e-54 2js1-a1-m1-cA_2js1-a1-m1-cB
3 2gsv-a3-m4-cB 66 68 0.8250 1.0000 0.9706 3.19e-40 2gsv-a3-m2-cA_2gsv-a3-m4-cB
4 2gsv-a2-m2-cB 66 68 0.8250 1.0000 0.9706 3.19e-40 2gsv-a2-m2-cA_2gsv-a2-m2-cB
5 2gsv-a3-m2-cA 65 67 0.8125 1.0000 0.9701 1.32e-39 2gsv-a3-m1-cA_2gsv-a3-m2-cA, 2gsv-a3-m2-cA_2gsv-a3-m4-cB
6 2gsv-a3-m1-cA 65 67 0.8125 1.0000 0.9701 1.32e-39 2gsv-a3-m1-cA_2gsv-a3-m2-cA
7 2gsv-a2-m2-cA 65 67 0.8125 1.0000 0.9701 1.32e-39 2gsv-a2-m2-cA_2gsv-a2-m2-cB
8 4ic6-a1-m2-cC 335 57 0.2750 0.0657 0.3860 0.40 4ic6-a1-m2-cC_4ic6-a1-m2-cA
9 4ic6-a1-m2-cA 340 57 0.2750 0.0647 0.3860 0.40 4ic6-a1-m2-cC_4ic6-a1-m2-cA
10 4ic6-a1-m1-cA 340 57 0.2750 0.0647 0.3860 0.40 4ic6-a1-m2-cB_4ic6-a1-m1-cA
11 4z6k-a1-m1-cC 345 41 0.1250 0.0290 0.2439 1.5 4z6k-a1-m1-cD_4z6k-a1-m1-cC
12 4z6k-a1-m1-cA 345 41 0.1250 0.0290 0.2439 1.5 4z6k-a1-m1-cD_4z6k-a1-m1-cA
13 3vcy-a5-m1-cD 419 40 0.1250 0.0239 0.2500 1.9 3vcy-a5-m1-cA_3vcy-a5-m1-cD, 3vcy-a5-m1-cB_3vcy-a5-m1-cD, 3vcy-a5-m1-cC_3vcy-a5-m1-cD
14 3vcy-a5-m1-cC 419 40 0.1250 0.0239 0.2500 1.9 3vcy-a5-m1-cC_3vcy-a5-m1-cD
15 3vcy-a5-m1-cB 419 40 0.1250 0.0239 0.2500 1.9 3vcy-a5-m1-cB_3vcy-a5-m1-cD
16 3vcy-a5-m1-cA 419 40 0.1250 0.0239 0.2500 1.9 3vcy-a5-m1-cA_3vcy-a5-m1-cD
17 3r77-a1-m1-cA 205 57 0.2000 0.0780 0.2807 3.2 3r77-a1-m1-cA_3r77-a1-m1-cB
18 3r77-a1-m1-cB 206 57 0.2000 0.0777 0.2807 3.2 3r77-a1-m1-cA_3r77-a1-m1-cB
19 3tsd-a2-m4-cB 426 22 0.1375 0.0258 0.5000 5.0 3tsd-a2-m2-cB_3tsd-a2-m4-cB
20 3tsd-a2-m2-cB 426 22 0.1375 0.0258 0.5000 5.0 3tsd-a2-m2-cB_3tsd-a2-m4-cB
21 6dvi-a2-m7-cB 394 24 0.1500 0.0305 0.5000 5.0 6dvi-a2-m1-cD_6dvi-a2-m7-cB
22 3ixx-a1-m9-cC 400 33 0.1625 0.0325 0.3939 5.7 3ixx-a1-m10-cB_3ixx-a1-m9-cC
23 3ixx-a1-m10-cB 400 33 0.1625 0.0325 0.3939 5.7 3ixx-a1-m10-cB_3ixx-a1-m9-cC
24 2of6-a1-m9-cC 400 33 0.1625 0.0325 0.3939 5.7 2of6-a1-m9-cA_2of6-a1-m9-cC
25 2of6-a1-m9-cA 400 33 0.1625 0.0325 0.3939 5.7 2of6-a1-m9-cA_2of6-a1-m9-cC
26 7kva-a1-m9-cC 501 33 0.1625 0.0259 0.3939 5.8 7kva-a1-m54-cB_7kva-a1-m9-cC, 7kva-a1-m9-cA_7kva-a1-m9-cC, 7kva-a1-m9-cB_7kva-a1-m9-cC
27 7kva-a1-m9-cB 501 33 0.1625 0.0259 0.3939 5.8 7kva-a1-m54-cB_7kva-a1-m9-cB, 7kva-a1-m9-cA_7kva-a1-m9-cB, 7kva-a1-m9-cB_7kva-a1-m9-cC
28 7kva-a1-m9-cA 501 33 0.1625 0.0259 0.3939 5.8 7kva-a1-m8-cA_7kva-a1-m9-cA, 7kva-a1-m9-cA_7kva-a1-m9-cB, 7kva-a1-m9-cA_7kva-a1-m9-cC
29 7kva-a1-m8-cA 501 33 0.1625 0.0259 0.3939 5.8 7kva-a1-m8-cA_7kva-a1-m9-cA
30 7kva-a1-m54-cB 501 33 0.1625 0.0259 0.3939 5.8 7kva-a1-m54-cB_7kva-a1-m9-cB, 7kva-a1-m54-cB_7kva-a1-m9-cC
31 7kvb-a1-m9-cC 501 33 0.1625 0.0259 0.3939 7.0 7kvb-a1-m54-cB_7kvb-a1-m9-cC, 7kvb-a1-m9-cA_7kvb-a1-m9-cC, 7kvb-a1-m9-cB_7kvb-a1-m9-cC
32 7kvb-a1-m9-cB 501 33 0.1625 0.0259 0.3939 7.0 7kvb-a1-m10-cA_7kvb-a1-m9-cB, 7kvb-a1-m54-cB_7kvb-a1-m9-cB, 7kvb-a1-m9-cA_7kvb-a1-m9-cB, 7kvb-a1-m9-cB_7kvb-a1-m9-cC
33 7kvb-a1-m9-cA 501 33 0.1625 0.0259 0.3939 7.0 7kvb-a1-m8-cA_7kvb-a1-m9-cA, 7kvb-a1-m9-cA_7kvb-a1-m9-cB, 7kvb-a1-m9-cA_7kvb-a1-m9-cC
34 7kvb-a1-m8-cA 501 33 0.1625 0.0259 0.3939 7.0 7kvb-a1-m8-cA_7kvb-a1-m9-cA
35 7kvb-a1-m54-cB 501 33 0.1625 0.0259 0.3939 7.0 7kvb-a1-m54-cB_7kvb-a1-m9-cB, 7kvb-a1-m54-cB_7kvb-a1-m9-cC
36 7kvb-a1-m10-cA 501 33 0.1625 0.0259 0.3939 7.0 7kvb-a1-m10-cA_7kvb-a1-m9-cB
37 1l5x-a2-m2-cB 272 26 0.1125 0.0331 0.3462 8.1 1l5x-a2-m1-cA_1l5x-a2-m2-cB, 1l5x-a2-m1-cB_1l5x-a2-m2-cB, 1l5x-a2-m2-cA_1l5x-a2-m2-cB
38 1l5x-a2-m1-cB 272 26 0.1125 0.0331 0.3462 8.1 1l5x-a2-m1-cB_1l5x-a2-m2-cB
39 6iog-a1-m1-cB 374 8 0.0875 0.0187 0.8750 9.1 6iog-a1-m1-cA_6iog-a1-m1-cB
40 7nfc-a1-m1-cF 3557 33 0.1125 0.0025 0.2727 9.4 7nfc-a1-m1-cF_7nfc-a1-m1-cA
41 7nfc-a1-m1-cA 3562 33 0.1125 0.0025 0.2727 9.7 7nfc-a1-m1-cF_7nfc-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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