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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=59)
MSGGGVFTDILAAAGRIFEVMVEGHWETVGMLFDSLGKGTMRINRNAYGSMGGGSLRGS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5lcb-a1-m1-cN 59 59 1.0000 1.0000 1.0000 7.60e-37 5lcb-a1-m1-cL_5lcb-a1-m1-cN
2 5lcb-a1-m1-cL 59 59 1.0000 1.0000 1.0000 7.60e-37 5lcb-a1-m1-cL_5lcb-a1-m1-cN
3 2w1r-a1-m2-cA 117 31 0.1695 0.0855 0.3226 3.0 2w1r-a1-m1-cA_2w1r-a1-m2-cA
4 2w1r-a1-m1-cA 117 31 0.1695 0.0855 0.3226 3.0 2w1r-a1-m1-cA_2w1r-a1-m2-cA
5 2w1t-a1-m1-cA 175 32 0.1695 0.0571 0.3125 4.9 2w1t-a1-m1-cB_2w1t-a1-m1-cA
6 2w1t-a1-m1-cB 173 32 0.1695 0.0578 0.3125 5.1 2w1t-a1-m1-cB_2w1t-a1-m1-cA
7 5z79-a2-m1-cD 577 23 0.1695 0.0173 0.4348 5.3 5z79-a2-m1-cD_5z79-a2-m1-cC
8 5z79-a2-m1-cC 599 23 0.1695 0.0167 0.4348 5.3 5z79-a2-m1-cD_5z79-a2-m1-cC
9 7dkc-a1-m1-cB 697 29 0.1525 0.0129 0.3103 6.6 7dkc-a1-m1-cA_7dkc-a1-m1-cB
10 7dkc-a1-m1-cA 697 29 0.1525 0.0129 0.3103 6.6 7dkc-a1-m1-cA_7dkc-a1-m1-cB
11 3won-a2-m2-cB 697 29 0.1525 0.0129 0.3103 7.6 3won-a2-m1-cA_3won-a2-m2-cB
12 3won-a2-m1-cA 697 29 0.1525 0.0129 0.3103 7.6 3won-a2-m1-cA_3won-a2-m2-cB
13 3wom-a1-m1-cB 697 29 0.1525 0.0129 0.3103 7.6 3wom-a1-m1-cA_3wom-a1-m1-cB
14 3wom-a1-m1-cA 697 29 0.1525 0.0129 0.3103 7.6 3wom-a1-m1-cA_3wom-a1-m1-cB
15 1t6t-a1-m1-c2 108 26 0.2203 0.1204 0.5000 8.5 1t6t-a1-m1-c1_1t6t-a1-m1-c2
16 4cbf-a1-m9-cE 495 55 0.3220 0.0384 0.3455 8.7 4cbf-a1-m24-cA_4cbf-a1-m9-cE, 4cbf-a1-m9-cA_4cbf-a1-m9-cE
17 4cbf-a1-m9-cC 495 55 0.3220 0.0384 0.3455 8.7 4cbf-a1-m8-cC_4cbf-a1-m9-cC, 4cbf-a1-m9-cA_4cbf-a1-m9-cC
18 4cbf-a1-m9-cA 495 55 0.3220 0.0384 0.3455 8.7 4cbf-a1-m9-cA_4cbf-a1-m9-cC, 4cbf-a1-m9-cA_4cbf-a1-m9-cE
19 4cbf-a1-m8-cC 495 55 0.3220 0.0384 0.3455 8.7 4cbf-a1-m8-cC_4cbf-a1-m9-cC
20 4cbf-a1-m24-cA 495 55 0.3220 0.0384 0.3455 8.7 4cbf-a1-m24-cA_4cbf-a1-m9-cE
21 1t6t-a1-m1-c1 106 26 0.2203 0.1226 0.5000 8.8 1t6t-a1-m1-c1_1t6t-a1-m1-c2

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Reference:
Jacob Schwartz et al.

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