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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=93)
MSGLRVYSTSVTGSREIKSQQSEVTRILDGKRIQYQLVDISQDNALRDEMRTLAGNPKAT
PPQIVNGNHYCGDYELFVEAVEQDTLQEFLKLA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1t1v-a1-m1-cB 93 93 1.0000 1.0000 1.0000 2.60e-66 1t1v-a1-m1-cA_1t1v-a1-m1-cB
2 1t1v-a1-m1-cA 93 93 1.0000 1.0000 1.0000 2.60e-66 1t1v-a1-m1-cA_1t1v-a1-m1-cB
3 4k8m-a1-m2-cA 84 54 0.2473 0.2738 0.4259 0.005 4k8m-a1-m1-cA_4k8m-a1-m2-cA
4 4k8m-a1-m1-cA 84 54 0.2473 0.2738 0.4259 0.005 4k8m-a1-m1-cA_4k8m-a1-m2-cA
5 3ipz-a2-m3-cA 109 65 0.1935 0.1651 0.2769 0.081 3ipz-a2-m2-cA_3ipz-a2-m3-cA
6 3ipz-a2-m2-cA 109 65 0.1935 0.1651 0.2769 0.081 3ipz-a2-m2-cA_3ipz-a2-m3-cA
7 4dwl-a1-m1-cE 105 20 0.1290 0.1143 0.6000 0.26 4dwl-a1-m1-cD_4dwl-a1-m1-cE
8 4oo2-a1-m1-cB 488 59 0.1505 0.0287 0.2373 0.56 4oo2-a1-m1-cB_4oo2-a1-m1-cD
9 4oo2-a1-m1-cC 499 59 0.1505 0.0281 0.2373 0.56 4oo2-a1-m1-cD_4oo2-a1-m1-cC
10 4oo2-a1-m1-cA 495 59 0.1505 0.0283 0.2373 0.57 4oo2-a1-m1-cA_4oo2-a1-m1-cD
11 4oo2-a1-m1-cD 497 59 0.1505 0.0282 0.2373 0.57 4oo2-a1-m1-cA_4oo2-a1-m1-cD, 4oo2-a1-m1-cB_4oo2-a1-m1-cD, 4oo2-a1-m1-cD_4oo2-a1-m1-cC
12 4jlw-a1-m1-cD 395 34 0.1075 0.0253 0.2941 0.67 4jlw-a1-m1-cA_4jlw-a1-m1-cD, 4jlw-a1-m1-cB_4jlw-a1-m1-cD, 4jlw-a1-m1-cC_4jlw-a1-m1-cD
13 4jlw-a1-m1-cC 395 34 0.1075 0.0253 0.2941 0.67 4jlw-a1-m1-cC_4jlw-a1-m1-cD
14 4jlw-a1-m1-cB 395 34 0.1075 0.0253 0.2941 0.67 4jlw-a1-m1-cB_4jlw-a1-m1-cD
15 4jlw-a1-m1-cA 395 34 0.1075 0.0253 0.2941 0.67 4jlw-a1-m1-cA_4jlw-a1-m1-cD
16 3e7o-a1-m2-cB 326 25 0.1398 0.0399 0.5200 1.0 3e7o-a1-m2-cB_3e7o-a1-m1-cA
17 5j49-a1-m2-cB 292 35 0.1290 0.0411 0.3429 1.6 5j49-a1-m1-cB_5j49-a1-m2-cB, 5j49-a1-m2-cA_5j49-a1-m2-cB
18 5j49-a1-m2-cA 292 35 0.1290 0.0411 0.3429 1.6 5j49-a1-m2-cA_5j49-a1-m2-cB
19 5j49-a1-m1-cB 292 35 0.1290 0.0411 0.3429 1.6 5j49-a1-m1-cB_5j49-a1-m2-cB
20 3h4j-a3-m1-cA 316 39 0.1183 0.0348 0.2821 2.0 3h4j-a3-m1-cA_3h4j-a3-m1-cB
21 3h4j-a3-m1-cB 330 58 0.1613 0.0455 0.2586 2.2 3h4j-a3-m1-cA_3h4j-a3-m1-cB
22 4wpc-a1-m1-cB 288 52 0.2151 0.0694 0.3846 5.6 4wpc-a1-m1-cA_4wpc-a1-m1-cB
23 4wpc-a1-m1-cA 283 50 0.1935 0.0636 0.3600 7.7 4wpc-a1-m1-cA_4wpc-a1-m1-cB
24 5i1f-a1-m2-cA 290 35 0.1398 0.0448 0.3714 7.8 5i1f-a1-m1-cA_5i1f-a1-m2-cA
25 5i1f-a1-m1-cA 290 35 0.1398 0.0448 0.3714 7.8 5i1f-a1-m1-cA_5i1f-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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