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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=68)
MSISASEARQRLFPLIEQVNTDHQPVRITSRAGDAVLMSADDYDAWQETVYLLRSPENAR
RLMEAVAR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3d55-a4-m1-cC 86 68 1.0000 0.7907 1.0000 1.46e-45 3d55-a4-m1-cA_3d55-a4-m1-cC, 3d55-a4-m2-cB_3d55-a4-m1-cC
2 3cto-a5-m5-cC 86 68 1.0000 0.7907 1.0000 1.46e-45 3cto-a5-m1-cD_3cto-a5-m5-cC
3 3d55-a4-m2-cB 84 68 1.0000 0.8095 1.0000 1.69e-45 3d55-a4-m2-cB_3d55-a4-m1-cC
4 3d55-a4-m1-cA 68 68 1.0000 1.0000 1.0000 2.21e-45 3d55-a4-m1-cA_3d55-a4-m1-cC
5 3cto-a7-m1-cA 68 68 1.0000 1.0000 1.0000 2.21e-45 3cto-a7-m1-cA_3cto-a7-m1-cB, 3cto-a7-m1-cD_3cto-a7-m1-cA
6 3cto-a6-m5-cA 68 68 1.0000 1.0000 1.0000 2.21e-45 3cto-a6-m5-cA_3cto-a6-m1-cB
7 3oei-a3-m1-cJ 86 67 0.9853 0.7791 1.0000 1.08e-44 3oei-a3-m1-cI_3oei-a3-m1-cJ
8 3oei-a3-m1-cI 83 67 0.9853 0.8072 1.0000 1.12e-44 3oei-a3-m1-cI_3oei-a3-m1-cJ
9 3cto-a7-m1-cB 83 67 0.9853 0.8072 1.0000 1.12e-44 3cto-a7-m1-cA_3cto-a7-m1-cB
10 3cto-a6-m1-cB 83 67 0.9853 0.8072 1.0000 1.12e-44 3cto-a6-m5-cA_3cto-a6-m1-cB
11 3cto-a7-m1-cD 65 65 0.9559 1.0000 1.0000 3.26e-43 3cto-a7-m1-cD_3cto-a7-m1-cA
12 3cto-a5-m1-cD 65 65 0.9559 1.0000 1.0000 3.26e-43 3cto-a5-m1-cD_3cto-a5-m5-cC
13 2a6q-a3-m1-cC 86 66 0.5000 0.3953 0.5152 9.75e-17 2a6q-a3-m1-cD_2a6q-a3-m1-cC
14 2a6q-a3-m1-cA 86 66 0.5000 0.3953 0.5152 9.75e-17 2a6q-a3-m1-cD_2a6q-a3-m1-cA
15 6l8e-a1-m1-cA 83 63 0.3824 0.3133 0.4127 1.75e-09 6l8e-a1-m1-cB_6l8e-a1-m1-cA
16 2a6q-a3-m1-cD 58 53 0.3676 0.4310 0.4717 2.26e-09 2a6q-a3-m1-cB_2a6q-a3-m1-cD, 2a6q-a3-m1-cD_2a6q-a3-m1-cA, 2a6q-a3-m1-cD_2a6q-a3-m1-cC
17 2a6q-a3-m1-cB 58 53 0.3676 0.4310 0.4717 2.26e-09 2a6q-a3-m1-cB_2a6q-a3-m1-cD
18 7v6w-a2-m1-cI 56 51 0.2647 0.3214 0.3529 8.23e-08 7v6w-a2-m1-cI_7v6w-a2-m1-cJ, 7v6w-a2-m1-cI_7v6w-a2-m1-cK
19 7v6w-a2-m1-cK 58 51 0.2647 0.3103 0.3529 8.98e-08 7v6w-a2-m1-cI_7v6w-a2-m1-cK
20 7v6w-a2-m1-cJ 85 51 0.2647 0.2118 0.3529 3.30e-07 7v6w-a2-m1-cI_7v6w-a2-m1-cJ
21 6l8e-a2-m1-cJ 59 53 0.3235 0.3729 0.4151 2.42e-06 6l8e-a2-m1-cL_6l8e-a2-m1-cJ
22 6l8e-a1-m1-cB 54 48 0.3088 0.3889 0.4375 1.75e-05 6l8e-a1-m1-cB_6l8e-a1-m1-cA
23 6l8e-a2-m1-cL 57 48 0.3088 0.3684 0.4375 2.32e-05 6l8e-a2-m1-cL_6l8e-a2-m1-cJ
24 3g5o-a1-m1-cD 92 61 0.2647 0.1957 0.2951 0.014 3g5o-a1-m1-cA_3g5o-a1-m1-cD
25 3g5o-a1-m1-cA 92 61 0.2647 0.1957 0.2951 0.014 3g5o-a1-m1-cA_3g5o-a1-m1-cD
26 1lam-a1-m6-cA 484 33 0.2059 0.0289 0.4242 0.65 1lam-a1-m2-cA_1lam-a1-m6-cA, 1lam-a1-m3-cA_1lam-a1-m6-cA, 1lam-a1-m5-cA_1lam-a1-m6-cA
27 1lam-a1-m5-cA 484 33 0.2059 0.0289 0.4242 0.65 1lam-a1-m5-cA_1lam-a1-m6-cA
28 1lam-a1-m3-cA 484 33 0.2059 0.0289 0.4242 0.65 1lam-a1-m3-cA_1lam-a1-m6-cA
29 1lam-a1-m2-cA 484 33 0.2059 0.0289 0.4242 0.65 1lam-a1-m2-cA_1lam-a1-m6-cA
30 5m86-a2-m1-cI 312 28 0.1618 0.0353 0.3929 7.4 5m86-a2-m1-cH_5m86-a2-m1-cI
31 5m86-a2-m1-cH 312 28 0.1618 0.0353 0.3929 7.4 5m86-a2-m1-cH_5m86-a2-m1-cI

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Reference:
Jacob Schwartz et al.

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