HomodimerDB

Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB

>protein (length=86)
MSISASEARQRLFPLIEQVNTDHQPVRITSRAGDAVLMSADDYDAWQETVYLLRSPENAR
RLMEAVARDKAGHSAFTKSVDELREM

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Dimers
1	3d55-a4-m1-cC	86	86	1.0000	1.0000	1.0000	6.88e-60	3d55-a4-m1-cA_3d55-a4-m1-cC, 3d55-a4-m2-cB_3d55-a4-m1-cC
2	3cto-a5-m5-cC	86	86	1.0000	1.0000	1.0000	6.88e-60	3cto-a5-m1-cD_3cto-a5-m5-cC
3	3oei-a3-m1-cJ	86	85	0.9884	0.9884	1.0000	4.60e-59	3oei-a3-m1-cI_3oei-a3-m1-cJ
4	3d55-a4-m2-cB	84	84	0.9767	1.0000	1.0000	2.74e-58	3d55-a4-m2-cB_3d55-a4-m1-cC
5	3cto-a7-m1-cB	83	83	0.9651	1.0000	1.0000	2.01e-57	3cto-a7-m1-cA_3cto-a7-m1-cB
6	3cto-a6-m1-cB	83	83	0.9651	1.0000	1.0000	2.01e-57	3cto-a6-m5-cA_3cto-a6-m1-cB
7	3oei-a3-m1-cI	83	85	0.9419	0.9759	0.9529	2.86e-53	3oei-a3-m1-cI_3oei-a3-m1-cJ
8	3d55-a4-m1-cA	68	68	0.7907	1.0000	1.0000	1.84e-45	3d55-a4-m1-cA_3d55-a4-m1-cC
9	3cto-a7-m1-cA	68	68	0.7907	1.0000	1.0000	1.84e-45	3cto-a7-m1-cA_3cto-a7-m1-cB, 3cto-a7-m1-cD_3cto-a7-m1-cA
10	3cto-a6-m5-cA	68	68	0.7907	1.0000	1.0000	1.84e-45	3cto-a6-m5-cA_3cto-a6-m1-cB
11	3cto-a7-m1-cD	65	65	0.7558	1.0000	1.0000	2.99e-43	3cto-a7-m1-cD_3cto-a7-m1-cA
12	3cto-a5-m1-cD	65	65	0.7558	1.0000	1.0000	2.99e-43	3cto-a5-m1-cD_3cto-a5-m5-cC
13	2a6q-a3-m1-cC	86	72	0.4186	0.4186	0.5000	2.10e-17	2a6q-a3-m1-cD_2a6q-a3-m1-cC
14	2a6q-a3-m1-cA	86	72	0.4186	0.4186	0.5000	2.10e-17	2a6q-a3-m1-cD_2a6q-a3-m1-cA
15	6l8e-a1-m1-cA	83	77	0.3488	0.3614	0.3896	3.27e-10	6l8e-a1-m1-cB_6l8e-a1-m1-cA
16	2a6q-a3-m1-cD	58	53	0.2907	0.4310	0.4717	4.22e-09	2a6q-a3-m1-cB_2a6q-a3-m1-cD, 2a6q-a3-m1-cD_2a6q-a3-m1-cA, 2a6q-a3-m1-cD_2a6q-a3-m1-cC
17	2a6q-a3-m1-cB	58	53	0.2907	0.4310	0.4717	4.22e-09	2a6q-a3-m1-cB_2a6q-a3-m1-cD
18	7v6w-a2-m1-cI	56	51	0.2093	0.3214	0.3529	1.36e-07	7v6w-a2-m1-cI_7v6w-a2-m1-cJ, 7v6w-a2-m1-cI_7v6w-a2-m1-cK
19	7v6w-a2-m1-cK	58	51	0.2093	0.3103	0.3529	1.40e-07	7v6w-a2-m1-cI_7v6w-a2-m1-cK
20	7v6w-a2-m1-cJ	85	51	0.2093	0.2118	0.3529	4.24e-07	7v6w-a2-m1-cI_7v6w-a2-m1-cJ
21	6l8e-a2-m1-cJ	59	53	0.2558	0.3729	0.4151	4.52e-06	6l8e-a2-m1-cL_6l8e-a2-m1-cJ
22	6l8e-a1-m1-cB	54	48	0.2442	0.3889	0.4375	3.43e-05	6l8e-a1-m1-cB_6l8e-a1-m1-cA
23	6l8e-a2-m1-cL	57	48	0.2442	0.3684	0.4375	4.74e-05	6l8e-a2-m1-cL_6l8e-a2-m1-cJ
24	3g5o-a1-m1-cD	92	80	0.2907	0.2717	0.3125	0.004	3g5o-a1-m1-cA_3g5o-a1-m1-cD
25	3g5o-a1-m1-cA	92	80	0.2907	0.2717	0.3125	0.004	3g5o-a1-m1-cA_3g5o-a1-m1-cD
26	1lam-a1-m6-cA	484	48	0.1977	0.0351	0.3542	0.82	1lam-a1-m2-cA_1lam-a1-m6-cA, 1lam-a1-m3-cA_1lam-a1-m6-cA, 1lam-a1-m5-cA_1lam-a1-m6-cA
27	1lam-a1-m5-cA	484	48	0.1977	0.0351	0.3542	0.82	1lam-a1-m5-cA_1lam-a1-m6-cA
28	1lam-a1-m3-cA	484	48	0.1977	0.0351	0.3542	0.82	1lam-a1-m3-cA_1lam-a1-m6-cA
29	1lam-a1-m2-cA	484	48	0.1977	0.0351	0.3542	0.82	1lam-a1-m2-cA_1lam-a1-m6-cA
30	8bd7-a1-m1-cK	619	49	0.1977	0.0275	0.3469	4.1	8bd7-a1-m1-cC_8bd7-a1-m1-cK
31	8bd7-a1-m1-cC	619	49	0.1977	0.0275	0.3469	4.1	8bd7-a1-m1-cC_8bd7-a1-m1-cK

[Back]

Reference:
Jacob Schwartz et al.