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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=97)
MSITLSDSAAARVNTFLANRGKGFGLRLGVRTSGCSGMAYVLEFVDEPTPEDIVFEDKGV
KVVVDGKSLQFLDGTQLDFVKEGLNEGFKFTNPNVKD

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1r94-a1-m2-cB 97 97 1.0000 1.0000 1.0000 6.92e-67 1r94-a1-m1-cB_1r94-a1-m2-cB, 1r94-a1-m2-cA_1r94-a1-m2-cB
2 1r94-a1-m2-cA 97 97 1.0000 1.0000 1.0000 6.92e-67 1r94-a1-m2-cA_1r94-a1-m2-cB
3 1r94-a1-m1-cB 97 97 1.0000 1.0000 1.0000 6.92e-67 1r94-a1-m1-cB_1r94-a1-m2-cB
4 1s98-a1-m2-cB 97 96 0.9794 0.9794 0.9896 1.18e-65 1s98-a1-m1-cA_1s98-a1-m2-cB
5 1s98-a1-m1-cA 97 96 0.9794 0.9794 0.9896 1.18e-65 1s98-a1-m1-cA_1s98-a1-m2-cB
6 1x0g-a1-m1-cC 111 86 0.2577 0.2252 0.2907 2.69e-09 1x0g-a1-m1-cD_1x0g-a1-m1-cC
7 1x0g-a1-m1-cB 110 86 0.2577 0.2273 0.2907 2.75e-09 1x0g-a1-m1-cD_1x0g-a1-m1-cB
8 1x0g-a1-m1-cD 104 72 0.2165 0.2019 0.2917 4.30e-07 1x0g-a1-m1-cA_1x0g-a1-m1-cD, 1x0g-a1-m1-cD_1x0g-a1-m1-cB, 1x0g-a1-m1-cD_1x0g-a1-m1-cC
9 1x0g-a1-m1-cA 102 70 0.2165 0.2059 0.3000 4.81e-07 1x0g-a1-m1-cA_1x0g-a1-m1-cD
10 2pcl-a2-m6-cA 223 53 0.1856 0.0807 0.3396 0.89 2pcl-a2-m3-cA_2pcl-a2-m6-cA, 2pcl-a2-m4-cA_2pcl-a2-m6-cA
11 2pcl-a2-m4-cA 223 53 0.1856 0.0807 0.3396 0.89 2pcl-a2-m4-cA_2pcl-a2-m6-cA
12 2pcl-a2-m3-cA 223 53 0.1856 0.0807 0.3396 0.89 2pcl-a2-m3-cA_2pcl-a2-m6-cA
13 2pcj-a1-m1-cB 223 53 0.1856 0.0807 0.3396 0.89 2pcj-a1-m1-cA_2pcj-a1-m1-cB
14 2pcj-a1-m1-cA 223 53 0.1856 0.0807 0.3396 0.89 2pcj-a1-m1-cA_2pcj-a1-m1-cB
15 4zwv-a1-m1-cB 361 47 0.1340 0.0360 0.2766 2.2 4zwv-a1-m1-cA_4zwv-a1-m1-cB
16 4zwv-a1-m1-cA 361 47 0.1340 0.0360 0.2766 2.2 4zwv-a1-m1-cA_4zwv-a1-m1-cB
17 3qld-a1-m1-cB 366 18 0.0928 0.0246 0.5000 6.2 3qld-a1-m1-cB_3qld-a1-m1-cA
18 3qld-a1-m1-cA 375 18 0.0928 0.0240 0.5000 6.3 3qld-a1-m1-cB_3qld-a1-m1-cA
19 4z6x-a1-m2-cA 309 29 0.1134 0.0356 0.3793 7.0 4z6x-a1-m1-cA_4z6x-a1-m2-cA
20 4z6x-a1-m1-cA 309 29 0.1134 0.0356 0.3793 7.0 4z6x-a1-m1-cA_4z6x-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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