Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=59)
MSKLPQVKALYPYTAANDEELSFKVGDIITILEKDEGWWKGELNGQEGWIPNNYVKEIL

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 6a9c-a1-m1-cB 66 59 1.0000 0.8939 1.0000 6.04e-39 6a9c-a1-m1-cA_6a9c-a1-m1-cB
2 6a9c-a1-m1-cA 59 59 1.0000 1.0000 1.0000 2.50e-38 6a9c-a1-m1-cA_6a9c-a1-m1-cB
3 4iim-a1-m1-cA 57 55 0.4746 0.4912 0.5091 5.15e-16 4iim-a1-m1-cB_4iim-a1-m1-cA
4 4iim-a1-m1-cB 55 55 0.4746 0.5091 0.5091 5.99e-16 4iim-a1-m1-cB_4iim-a1-m1-cA
5 5sxp-a2-m1-cB 61 53 0.4237 0.4098 0.4717 2.26e-14 5sxp-a2-m1-cD_5sxp-a2-m1-cB
6 5sxp-a2-m1-cD 60 53 0.4237 0.4167 0.4717 2.38e-14 5sxp-a2-m1-cD_5sxp-a2-m1-cB
7 4iio-a1-m1-cB 57 55 0.4576 0.4737 0.4909 8.37e-14 4iio-a1-m1-cB_4iio-a1-m1-cA
8 4iio-a1-m1-cA 63 55 0.4576 0.4286 0.4909 9.33e-14 4iio-a1-m1-cB_4iio-a1-m1-cA
9 2esw-a3-m1-cB 57 53 0.4237 0.4386 0.4717 9.97e-14 2esw-a3-m1-cB_2esw-a3-m1-cA
10 2p4r-a2-m2-cA 55 53 0.4237 0.4545 0.4717 1.04e-13 2p4r-a2-m1-cA_2p4r-a2-m2-cA
11 2p4r-a2-m1-cA 55 53 0.4237 0.4545 0.4717 1.04e-13 2p4r-a2-m1-cA_2p4r-a2-m2-cA
12 2ak5-a1-m2-cB 64 53 0.4237 0.3906 0.4717 1.08e-13 2ak5-a1-m2-cA_2ak5-a1-m2-cB
13 2ak5-a1-m2-cA 60 53 0.4237 0.4167 0.4717 1.16e-13 2ak5-a1-m2-cA_2ak5-a1-m2-cB
14 2esw-a3-m1-cA 60 53 0.4237 0.4167 0.4717 1.30e-13 2esw-a3-m1-cB_2esw-a3-m1-cA
15 2d1x-a2-m1-cD 59 49 0.4407 0.4407 0.5306 2.28e-11 2d1x-a2-m1-cD_2d1x-a2-m1-cC
16 1wyx-a1-m1-cB 69 54 0.4237 0.3623 0.4630 2.60e-11 1wyx-a1-m1-cA_1wyx-a1-m1-cB
17 1wyx-a1-m1-cA 68 54 0.4237 0.3676 0.4630 2.63e-11 1wyx-a1-m1-cA_1wyx-a1-m1-cB
18 2d1x-a2-m1-cC 66 49 0.4407 0.3939 0.5306 3.48e-11 2d1x-a2-m1-cD_2d1x-a2-m1-cC
19 2sem-a1-m1-cB 59 50 0.3898 0.3898 0.4600 3.77e-11 2sem-a1-m1-cA_2sem-a1-m1-cB
20 2sem-a1-m1-cA 58 50 0.3898 0.3966 0.4600 4.15e-11 2sem-a1-m1-cA_2sem-a1-m1-cB
21 1bu1-a1-m1-cC 56 54 0.4068 0.4286 0.4444 4.52e-10 1bu1-a1-m1-cC_1bu1-a1-m1-cE
22 1bu1-a1-m1-cE 57 54 0.4068 0.4211 0.4444 5.28e-10 1bu1-a1-m1-cC_1bu1-a1-m1-cE
23 6gbu-a1-m1-cG 54 54 0.4576 0.5000 0.5000 5.69e-10 6gbu-a1-m1-cE_6gbu-a1-m1-cG
24 4u5w-a1-m1-cB 163 54 0.4068 0.1472 0.4444 3.07e-09 4u5w-a1-m1-cD_4u5w-a1-m1-cB
25 4u5w-a1-m1-cD 160 54 0.4068 0.1500 0.4444 3.21e-09 4u5w-a1-m1-cD_4u5w-a1-m1-cB
26 6aqb-a1-m2-cB 70 59 0.3729 0.3143 0.3729 5.92e-09 6aqb-a1-m1-cA_6aqb-a1-m2-cB
27 6aqb-a1-m1-cA 70 59 0.3729 0.3143 0.3729 5.92e-09 6aqb-a1-m1-cA_6aqb-a1-m2-cB
28 6cq7-a2-m2-cA 73 59 0.3729 0.3014 0.3729 6.98e-09 6cq7-a2-m1-cA_6cq7-a2-m2-cA
29 6cq7-a2-m1-cA 73 59 0.3729 0.3014 0.3729 6.98e-09 6cq7-a2-m1-cA_6cq7-a2-m2-cA
30 2hck-a1-m1-cB 437 54 0.4068 0.0549 0.4444 7.49e-09 2hck-a1-m1-cA_2hck-a1-m1-cB
31 2hck-a1-m1-cA 437 54 0.4068 0.0549 0.4444 7.49e-09 2hck-a1-m1-cA_2hck-a1-m1-cB
32 5k26-a1-m1-cB 75 59 0.3729 0.2933 0.3729 8.98e-09 5k26-a1-m1-cB_5k26-a1-m1-cA
33 5k26-a1-m1-cA 77 59 0.3729 0.2857 0.3729 9.70e-09 5k26-a1-m1-cB_5k26-a1-m1-cA
34 2d0n-a1-m1-cA 59 56 0.3220 0.3220 0.3393 1.35e-08 2d0n-a1-m1-cC_2d0n-a1-m1-cA
35 2d0n-a1-m1-cC 56 56 0.3220 0.3393 0.3393 1.44e-08 2d0n-a1-m1-cC_2d0n-a1-m1-cA
36 2iim-a1-m2-cA 62 51 0.3729 0.3548 0.4314 5.31e-08 2iim-a1-m1-cA_2iim-a1-m2-cA
37 2iim-a1-m1-cA 62 51 0.3729 0.3548 0.4314 5.31e-08 2iim-a1-m1-cA_2iim-a1-m2-cA
38 3nmz-a1-m1-cC 85 51 0.3051 0.2118 0.3529 7.75e-08 3nmz-a1-m1-cD_3nmz-a1-m1-cC
39 3nmz-a1-m1-cD 84 51 0.3051 0.2143 0.3529 8.02e-08 3nmz-a1-m1-cD_3nmz-a1-m1-cC
40 7pvz-a1-m1-cB 60 50 0.3898 0.3833 0.4600 1.01e-07 7pvz-a1-m1-cA_7pvz-a1-m1-cB
41 7pvz-a1-m1-cA 60 50 0.3898 0.3833 0.4600 1.01e-07 7pvz-a1-m1-cA_7pvz-a1-m1-cB
42 1x27-a1-m1-cF 163 51 0.3729 0.1350 0.4314 1.84e-07 1x27-a1-m1-cA_1x27-a1-m1-cF, 1x27-a1-m1-cD_1x27-a1-m1-cF
43 1x27-a1-m1-cD 163 51 0.3729 0.1350 0.4314 1.84e-07 1x27-a1-m1-cD_1x27-a1-m1-cF
44 1x27-a1-m1-cA 163 51 0.3729 0.1350 0.4314 1.84e-07 1x27-a1-m1-cA_1x27-a1-m1-cF
45 6gbu-a1-m1-cD 64 50 0.3898 0.3594 0.4600 1.99e-07 6gbu-a1-m1-cH_6gbu-a1-m1-cD
46 6gbu-a1-m1-cH 63 50 0.3898 0.3651 0.4600 2.04e-07 6gbu-a1-m1-cH_6gbu-a1-m1-cD
47 2hda-a3-m3-cA 59 50 0.3898 0.3898 0.4600 2.77e-07 2hda-a3-m2-cA_2hda-a3-m3-cA
48 2hda-a3-m2-cA 59 50 0.3898 0.3898 0.4600 2.77e-07 2hda-a3-m2-cA_2hda-a3-m3-cA
49 2hda-a2-m6-cA 59 50 0.3898 0.3898 0.4600 2.77e-07 2hda-a2-m2-cA_2hda-a2-m6-cA
50 2hda-a2-m2-cA 59 50 0.3898 0.3898 0.4600 2.77e-07 2hda-a2-m2-cA_2hda-a2-m6-cA
51 1shf-a1-m2-cB 59 53 0.3729 0.3729 0.4151 3.02e-07 1shf-a1-m2-cA_1shf-a1-m2-cB
52 1shf-a1-m2-cA 59 53 0.3729 0.3729 0.4151 3.02e-07 1shf-a1-m2-cA_1shf-a1-m2-cB
53 4xi2-a1-m2-cA 421 58 0.4068 0.0570 0.4138 3.53e-07 4xi2-a1-m1-cA_4xi2-a1-m2-cA
54 4xi2-a1-m1-cA 421 58 0.4068 0.0570 0.4138 3.53e-07 4xi2-a1-m1-cA_4xi2-a1-m2-cA
55 7dpa-a1-m1-cD 1642 50 0.3390 0.0122 0.4000 3.62e-07 7dpa-a1-m1-cA_7dpa-a1-m1-cD
56 7dpa-a1-m1-cA 1642 50 0.3390 0.0122 0.4000 3.62e-07 7dpa-a1-m1-cA_7dpa-a1-m1-cD
57 6gbu-a1-m1-cE 42 46 0.3898 0.5476 0.5000 6.49e-07 6gbu-a1-m1-cE_6gbu-a1-m1-cG
58 4le9-a1-m2-cA 59 50 0.3559 0.3559 0.4200 1.48e-06 4le9-a1-m1-cA_4le9-a1-m2-cA
59 4le9-a1-m1-cA 59 50 0.3559 0.3559 0.4200 1.48e-06 4le9-a1-m1-cA_4le9-a1-m2-cA
60 1ov3-a2-m2-cB 127 56 0.2712 0.1260 0.2857 1.57e-06 1ov3-a2-m2-cB_1ov3-a2-m2-cA
61 1jqq-a1-m1-cD 73 65 0.4576 0.3699 0.4154 1.70e-06 1jqq-a1-m1-cC_1jqq-a1-m1-cD, 1jqq-a1-m1-cD_1jqq-a1-m1-cA
62 1jqq-a1-m1-cA 79 65 0.4576 0.3418 0.4154 1.75e-06 1jqq-a1-m1-cA_1jqq-a1-m1-cB, 1jqq-a1-m1-cD_1jqq-a1-m1-cA
63 1jqq-a1-m1-cB 82 65 0.4576 0.3293 0.4154 1.92e-06 1jqq-a1-m1-cA_1jqq-a1-m1-cB
64 1ov3-a2-m2-cA 134 56 0.2712 0.1194 0.2857 2.09e-06 1ov3-a2-m1-cA_1ov3-a2-m2-cA, 1ov3-a2-m2-cB_1ov3-a2-m2-cA
65 1ov3-a2-m1-cA 134 56 0.2712 0.1194 0.2857 2.09e-06 1ov3-a2-m1-cA_1ov3-a2-m2-cA
66 1i07-a1-m1-cB 59 48 0.3051 0.3051 0.3750 7.85e-06 1i07-a1-m1-cA_1i07-a1-m1-cB
67 1i07-a1-m1-cA 59 48 0.3051 0.3051 0.3750 7.85e-06 1i07-a1-m1-cA_1i07-a1-m1-cB
68 2j05-a1-m1-cA 61 59 0.3898 0.3770 0.3898 1.38e-05 2j05-a1-m1-cB_2j05-a1-m1-cA
69 2oaw-a5-m4-cD 65 61 0.3898 0.3538 0.3770 1.71e-05 2oaw-a5-m1-cB_2oaw-a5-m4-cD, 2oaw-a5-m3-cC_2oaw-a5-m4-cD
70 2oaw-a5-m3-cC 65 61 0.3898 0.3538 0.3770 1.71e-05 2oaw-a5-m3-cC_2oaw-a5-m4-cD
71 2oaw-a5-m1-cB 65 61 0.3898 0.3538 0.3770 1.71e-05 2oaw-a5-m1-cB_2oaw-a5-m4-cD
72 2j05-a1-m1-cB 57 55 0.3729 0.3860 0.4000 2.35e-05 2j05-a1-m1-cB_2j05-a1-m1-cA
73 1bb9-a1-m2-cA 83 69 0.3559 0.2530 0.3043 2.37e-05 1bb9-a1-m1-cA_1bb9-a1-m2-cA
74 1bb9-a1-m1-cA 83 69 0.3559 0.2530 0.3043 2.37e-05 1bb9-a1-m1-cA_1bb9-a1-m2-cA
75 1jqq-a1-m1-cC 70 64 0.4237 0.3571 0.3906 3.52e-05 1jqq-a1-m1-cC_1jqq-a1-m1-cD
76 2bzy-a1-m1-cB 62 44 0.2712 0.2581 0.3636 1.55e-04 2bzy-a1-m1-cA_2bzy-a1-m1-cB
77 2bzy-a1-m1-cA 62 44 0.2712 0.2581 0.3636 1.55e-04 2bzy-a1-m1-cA_2bzy-a1-m1-cB
78 1k9a-a7-m2-cD 433 52 0.3390 0.0462 0.3846 2.09e-04 1k9a-a7-m2-cD_1k9a-a7-m1-cC
79 1k9a-a7-m1-cC 438 52 0.3390 0.0457 0.3846 2.21e-04 1k9a-a7-m2-cD_1k9a-a7-m1-cC
80 1abq-a1-m2-cA 56 52 0.2542 0.2679 0.2885 2.83e-04 1abq-a1-m1-cA_1abq-a1-m2-cA
81 1abq-a1-m1-cA 56 52 0.2542 0.2679 0.2885 2.83e-04 1abq-a1-m1-cA_1abq-a1-m2-cA
82 1zuy-a1-m1-cB 58 56 0.3559 0.3621 0.3750 4.08e-04 1zuy-a1-m1-cA_1zuy-a1-m1-cB
83 1zuy-a1-m1-cA 58 56 0.3559 0.3621 0.3750 4.08e-04 1zuy-a1-m1-cA_1zuy-a1-m1-cB
84 1opl-a3-m2-cA 451 52 0.2542 0.0333 0.2885 0.001 1opl-a3-m1-cA_1opl-a3-m2-cA
85 1opl-a3-m1-cA 451 52 0.2542 0.0333 0.2885 0.001 1opl-a3-m1-cA_1opl-a3-m2-cA
86 3eg1-a1-m1-cB 56 52 0.2373 0.2500 0.2692 0.002 3eg1-a1-m1-cB_3eg1-a1-m1-cA
87 3eg1-a1-m1-cA 58 52 0.2373 0.2414 0.2692 0.002 3eg1-a1-m1-cB_3eg1-a1-m1-cA
88 2xkx-a1-m1-cB 718 41 0.2203 0.0181 0.3171 0.028 2xkx-a1-m1-cB_2xkx-a1-m1-cA
89 2xkx-a1-m1-cA 721 41 0.2203 0.0180 0.3171 0.028 2xkx-a1-m1-cB_2xkx-a1-m1-cA
90 6tgc-a1-m1-cD 1450 56 0.2542 0.0103 0.2679 0.037 6tgc-a1-m1-cA_6tgc-a1-m1-cD
91 6tgc-a1-m1-cA 1450 56 0.2542 0.0103 0.2679 0.037 6tgc-a1-m1-cA_6tgc-a1-m1-cD
92 7m4r-a1-m1-cA 360 37 0.2203 0.0361 0.3514 0.043 7m4r-a1-m1-cB_7m4r-a1-m1-cA
93 7m4r-a1-m1-cB 270 37 0.2203 0.0481 0.3514 0.047 7m4r-a1-m1-cB_7m4r-a1-m1-cA
94 2ix5-a1-m1-cD 415 30 0.2203 0.0313 0.4333 2.5 2ix5-a1-m1-cA_2ix5-a1-m1-cD, 2ix5-a1-m1-cB_2ix5-a1-m1-cD, 2ix5-a1-m1-cC_2ix5-a1-m1-cD
95 2ix5-a1-m1-cC 415 30 0.2203 0.0313 0.4333 2.5 2ix5-a1-m1-cC_2ix5-a1-m1-cD
96 2ix5-a1-m1-cB 415 30 0.2203 0.0313 0.4333 2.5 2ix5-a1-m1-cB_2ix5-a1-m1-cD
97 2ix5-a1-m1-cA 415 30 0.2203 0.0313 0.4333 2.5 2ix5-a1-m1-cA_2ix5-a1-m1-cD

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600