Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=78)
MSLEVFEKLEAKVQQAIDTITLLQMEIEELKEKNNSLSQEVQNAQHQREELERENNHLKE
QQNGWQERLQALLGRMEE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2jee-a2-m1-cD 78 78 1.0000 1.0000 1.0000 5.80e-49 2jee-a2-m1-cC_2jee-a2-m1-cD
2 2jee-a2-m1-cC 78 78 1.0000 1.0000 1.0000 5.80e-49 2jee-a2-m1-cC_2jee-a2-m1-cD
3 6tml-a1-m1-cd9 254 63 0.2051 0.0630 0.2540 0.66 6tml-a1-m1-cD9_6tml-a1-m1-cd9
4 6tml-a1-m1-cD9 254 63 0.2051 0.0630 0.2540 0.66 6tml-a1-m1-cD9_6tml-a1-m1-cd9
5 7xfr-a1-m2-cD 62 67 0.2436 0.3065 0.2836 1.2 7xfr-a1-m2-cD_7xfr-a1-m1-cB
6 7xfr-a1-m1-cB 69 67 0.2436 0.2754 0.2836 1.5 7xfr-a1-m2-cD_7xfr-a1-m1-cB
7 7umt-a1-m1-c3 270 23 0.1410 0.0407 0.4783 2.8 7umt-a1-m1-c2_7umt-a1-m1-c3
8 7umt-a1-m1-c2 270 23 0.1410 0.0407 0.4783 2.8 7umt-a1-m1-c2_7umt-a1-m1-c3
9 4fin-a1-m1-cB 518 49 0.2051 0.0309 0.3265 3.8 4fin-a1-m1-cB_4fin-a1-m1-cA
10 7ums-a1-m1-c3 486 23 0.1410 0.0226 0.4783 5.4 7ums-a1-m1-c3_7ums-a1-m1-c1, 7ums-a1-m1-c3_7ums-a1-m1-c2
11 7ums-a1-m1-c2 499 23 0.1410 0.0220 0.4783 5.9 7ums-a1-m1-c1_7ums-a1-m1-c2, 7ums-a1-m1-c3_7ums-a1-m1-c2
12 7ums-a1-m1-c1 499 23 0.1410 0.0220 0.4783 5.9 7ums-a1-m1-c1_7ums-a1-m1-c2, 7ums-a1-m1-c3_7ums-a1-m1-c1
13 3d3i-a1-m1-cB 743 33 0.1538 0.0162 0.3636 7.2 3d3i-a1-m1-cA_3d3i-a1-m1-cB
14 3d3i-a1-m1-cA 743 33 0.1538 0.0162 0.3636 7.2 3d3i-a1-m1-cA_3d3i-a1-m1-cB
15 8co6-a1-m5-cA 726 23 0.1282 0.0138 0.4348 7.5 8co6-a1-m5-cA_8co6-a1-m5-cB
16 8co6-a1-m5-cB 744 23 0.1282 0.0134 0.4348 8.3 8co6-a1-m5-cA_8co6-a1-m5-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600