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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=65)
MSPYKKAIEITKRLLELLLSNPELAKKNLGGIATLISLLALISALDGTLDEKDIEPYIKK
LEESL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 8d09-a1-m4-cB 65 65 1.0000 1.0000 1.0000 1.15e-38 8d09-a1-m2-cA_8d09-a1-m4-cB
2 8d09-a1-m2-cA 65 65 1.0000 1.0000 1.0000 1.15e-38 8d09-a1-m2-cA_8d09-a1-m4-cB
3 1v02-a3-m1-cF 484 59 0.2923 0.0393 0.3220 1.3 1v02-a3-m1-cE_1v02-a3-m1-cF
4 1v02-a3-m1-cE 484 59 0.2923 0.0393 0.3220 1.3 1v02-a3-m1-cE_1v02-a3-m1-cF
5 7eyd-a1-m1-c19 1043 38 0.2308 0.0144 0.3947 2.7 7eyd-a1-m1-c19_7eyd-a1-m1-c09
6 7eyd-a1-m1-c09 1049 38 0.2308 0.0143 0.3947 2.7 7eyd-a1-m1-c19_7eyd-a1-m1-c09
7 3b1o-a1-m1-cB 303 33 0.1692 0.0363 0.3333 6.0 3b1o-a1-m1-cB_3b1o-a1-m1-cA
8 3b1r-a2-m1-cE 310 33 0.1692 0.0355 0.3333 6.1 3b1r-a2-m1-cB_3b1r-a2-m1-cE
9 3b1r-a2-m1-cB 310 33 0.1692 0.0355 0.3333 6.1 3b1r-a2-m1-cB_3b1r-a2-m1-cE
10 3b1o-a1-m1-cA 313 33 0.1692 0.0351 0.3333 6.1 3b1o-a1-m1-cB_3b1o-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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