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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=83)
MSRLTIDMTDQQHQSLKALAALQGKTIKQYALERLFPGDADADQAWQELKTMLGNRINDG
LAGKVSTKSVGEILDEELSGDRA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2an7-a1-m1-cB 83 83 1.0000 1.0000 1.0000 2.16e-56 2an7-a1-m1-cA_2an7-a1-m1-cB
2 2an7-a1-m1-cA 83 83 1.0000 1.0000 1.0000 2.16e-56 2an7-a1-m1-cA_2an7-a1-m1-cB
3 4jdm-a2-m1-cE 258 36 0.1807 0.0581 0.4167 0.018 4jdm-a2-m1-cE_4jdm-a2-m1-cF
4 4jdm-a2-m1-cF 264 36 0.1807 0.0568 0.4167 0.019 4jdm-a2-m1-cE_4jdm-a2-m1-cF
5 3rim-a2-m1-cD 694 63 0.2169 0.0259 0.2857 4.5 3rim-a2-m1-cB_3rim-a2-m1-cD
6 3rim-a2-m1-cB 694 63 0.2169 0.0259 0.2857 4.5 3rim-a2-m1-cB_3rim-a2-m1-cD
7 2rfq-a1-m1-cA 380 40 0.1566 0.0342 0.3250 5.0 2rfq-a1-m1-cD_2rfq-a1-m1-cA
8 2v6k-a1-m1-cB 214 56 0.1807 0.0701 0.2679 6.2 2v6k-a1-m1-cA_2v6k-a1-m1-cB
9 2v6k-a1-m1-cA 214 56 0.1807 0.0701 0.2679 6.2 2v6k-a1-m1-cA_2v6k-a1-m1-cB
10 1s49-a2-m2-cA 576 52 0.1807 0.0260 0.2885 9.9 1s49-a2-m1-cA_1s49-a2-m2-cA
11 1s49-a2-m1-cA 576 52 0.1807 0.0260 0.2885 9.9 1s49-a2-m1-cA_1s49-a2-m2-cA

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Reference:
Jacob Schwartz et al.

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