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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=75)
MSTVVSFRADDALVAALDELARATHRDRPYHLRQALAQYLERQQWQVAAIDEGLADANAG
RLLEHIEIEKRWGLQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6xrw-a2-m2-cD 75 75 1.0000 1.0000 1.0000 1.65e-49 6xrw-a2-m1-cD_6xrw-a2-m2-cD
2 6xrw-a2-m1-cD 75 75 1.0000 1.0000 1.0000 1.65e-49 6xrw-a2-m1-cD_6xrw-a2-m2-cD
3 1yvl-a4-m4-cB 653 39 0.2133 0.0245 0.4103 0.011 1yvl-a4-m1-cA_1yvl-a4-m4-cB
4 1yvl-a3-m4-cB 653 39 0.2133 0.0245 0.4103 0.011 1yvl-a3-m3-cB_1yvl-a3-m4-cB
5 1yvl-a3-m3-cB 653 39 0.2133 0.0245 0.4103 0.011 1yvl-a3-m3-cB_1yvl-a3-m4-cB
6 1yvl-a4-m1-cA 652 39 0.2133 0.0245 0.4103 0.013 1yvl-a4-m1-cA_1yvl-a4-m4-cB
7 1yvl-a3-m2-cA 652 39 0.2133 0.0245 0.4103 0.013 1yvl-a3-m1-cA_1yvl-a3-m2-cA
8 1yvl-a3-m1-cA 652 39 0.2133 0.0245 0.4103 0.013 1yvl-a3-m1-cA_1yvl-a3-m2-cA
9 4eru-a1-m1-cB 155 55 0.2533 0.1226 0.3455 0.019 4eru-a1-m1-cB_4eru-a1-m1-cA
10 4eru-a1-m1-cA 156 55 0.2533 0.1218 0.3455 0.020 4eru-a1-m1-cB_4eru-a1-m1-cA
11 1bgf-a1-m2-cA 124 42 0.1733 0.1048 0.3095 0.067 1bgf-a1-m1-cA_1bgf-a1-m2-cA
12 1bgf-a1-m1-cA 124 42 0.1733 0.1048 0.3095 0.067 1bgf-a1-m1-cA_1bgf-a1-m2-cA
13 6yvr-a1-m1-cBBB 470 23 0.1200 0.0191 0.3913 0.59 6yvr-a1-m1-cAAA_6yvr-a1-m1-cBBB
14 6yvr-a1-m1-cAAA 470 23 0.1200 0.0191 0.3913 0.59 6yvr-a1-m1-cAAA_6yvr-a1-m1-cBBB
15 6iya-a2-m1-cD 48 40 0.1600 0.2500 0.3000 1.7 6iya-a2-m1-cC_6iya-a2-m1-cD
16 6iya-a2-m1-cC 45 40 0.1600 0.2667 0.3000 1.8 6iya-a2-m1-cC_6iya-a2-m1-cD
17 4zia-a1-m1-cB 124 51 0.2400 0.1452 0.3529 2.5 4zia-a1-m1-cA_4zia-a1-m1-cB
18 4zia-a1-m1-cA 124 51 0.2400 0.1452 0.3529 2.5 4zia-a1-m1-cA_4zia-a1-m1-cB
19 4gpa-a1-m2-cA 379 46 0.2133 0.0422 0.3478 3.2 4gpa-a1-m1-cA_4gpa-a1-m2-cA
20 4gpa-a1-m1-cA 379 46 0.2133 0.0422 0.3478 3.2 4gpa-a1-m1-cA_4gpa-a1-m2-cA
21 6pnu-a3-m1-cB 482 33 0.1467 0.0228 0.3333 4.3 6pnu-a3-m1-cB_6pnu-a3-m3-cD
22 6pnu-a1-m2-cB 482 33 0.1467 0.0228 0.3333 4.3 6pnu-a1-m2-cB_6pnu-a1-m1-cC
23 6pnu-a1-m1-cC 483 33 0.1467 0.0228 0.3333 4.3 6pnu-a1-m1-cD_6pnu-a1-m1-cC, 6pnu-a1-m2-cB_6pnu-a1-m1-cC
24 6pnu-a3-m3-cD 482 33 0.1467 0.0228 0.3333 4.5 6pnu-a3-m1-cB_6pnu-a3-m3-cD
25 6pnu-a1-m1-cD 482 33 0.1467 0.0228 0.3333 4.5 6pnu-a1-m1-cD_6pnu-a1-m1-cC
26 8gy0-a1-m1-cB 314 57 0.2400 0.0573 0.3158 5.3 8gy0-a1-m1-cA_8gy0-a1-m1-cB
27 8gy0-a1-m1-cA 314 57 0.2400 0.0573 0.3158 5.3 8gy0-a1-m1-cA_8gy0-a1-m1-cB
28 3nyt-a1-m2-cA 359 38 0.1600 0.0334 0.3158 7.2 3nyt-a1-m1-cA_3nyt-a1-m2-cA
29 3nyt-a1-m1-cA 359 38 0.1600 0.0334 0.3158 7.2 3nyt-a1-m1-cA_3nyt-a1-m2-cA
30 8e77-a1-m2-cA 358 38 0.1467 0.0307 0.2895 8.2 8e77-a1-m1-cA_8e77-a1-m2-cA
31 8e77-a1-m1-cA 358 38 0.1467 0.0307 0.2895 8.2 8e77-a1-m1-cA_8e77-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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