Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=74)
MSVQDKQGQNINVGDTVYTPYRGGKHEGQVADIVTTKEEAAEKGVKNPPKVLFTDQNNKD
VAHNPGTLTDLDKQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4p5n-a1-m1-cB 74 74 1.0000 1.0000 1.0000 4.35e-50 4p5n-a1-m1-cA_4p5n-a1-m1-cB
2 4p5n-a1-m1-cA 74 74 1.0000 1.0000 1.0000 4.35e-50 4p5n-a1-m1-cA_4p5n-a1-m1-cB
3 5ot5-a1-m1-cB 325 51 0.2432 0.0554 0.3529 5.2 5ot5-a1-m1-cB_5ot5-a1-m1-cA
4 5ot5-a1-m1-cA 326 51 0.2432 0.0552 0.3529 5.2 5ot5-a1-m1-cB_5ot5-a1-m1-cA
5 5t1h-a4-m3-cA 331 51 0.2432 0.0544 0.3529 5.7 5t1h-a4-m1-cB_5t1h-a4-m3-cA
6 5t1h-a4-m1-cB 331 51 0.2432 0.0544 0.3529 5.7 5t1h-a4-m1-cB_5t1h-a4-m3-cA
7 5t1h-a3-m2-cA 331 51 0.2432 0.0544 0.3529 5.7 5t1h-a3-m1-cB_5t1h-a3-m2-cA
8 5t1h-a3-m1-cB 331 51 0.2432 0.0544 0.3529 5.7 5t1h-a3-m1-cB_5t1h-a3-m2-cA
9 3h30-a3-m1-cB 333 51 0.2432 0.0541 0.3529 5.8 3h30-a3-m1-cA_3h30-a3-m1-cB
10 3h30-a3-m1-cA 333 51 0.2432 0.0541 0.3529 5.8 3h30-a3-m1-cA_3h30-a3-m1-cB
11 3m1u-a1-m1-cB 405 37 0.1892 0.0346 0.3784 6.3 3m1u-a1-m1-cB_3m1u-a1-m1-cA
12 6v42-a1-m1-cB 453 38 0.1892 0.0309 0.3684 7.7 6v42-a1-m1-cA_6v42-a1-m1-cB
13 6v42-a1-m1-cA 453 38 0.1892 0.0309 0.3684 7.7 6v42-a1-m1-cA_6v42-a1-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600