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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=89)
MTPEIFVELFKESLWLVLIMVCAIIIPSLLIGLVVAIFQAATSINEQTLSFLPRLIITLL
ALMFFGHWMTQMLMDFFYSMIERLPQVLY

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6s3l-a1-m1-cI 89 89 1.0000 1.0000 1.0000 2.74e-59 6s3l-a1-m1-cH_6s3l-a1-m1-cI
2 6s3l-a1-m1-cH 89 89 1.0000 1.0000 1.0000 2.74e-59 6s3l-a1-m1-cH_6s3l-a1-m1-cI
3 6s3r-a1-m1-cJ 89 85 0.4944 0.4944 0.5176 4.48e-28 6s3r-a1-m1-cI_6s3r-a1-m1-cJ
4 6s3r-a1-m1-cI 89 85 0.4944 0.4944 0.5176 4.48e-28 6s3r-a1-m1-cI_6s3r-a1-m1-cJ
5 7agx-a1-m1-c1H 83 71 0.2697 0.2892 0.3380 4.99e-06 7agx-a1-m1-c1G_7agx-a1-m1-c1H
6 6q16-a1-m1-c7 84 71 0.2697 0.2857 0.3380 5.80e-06 6q16-a1-m1-c6_6q16-a1-m1-c7
7 6r6b-a1-m1-cI 85 74 0.2360 0.2471 0.2838 5.69e-04 6r6b-a1-m1-cH_6r6b-a1-m1-cI
8 6r6b-a1-m1-cH 85 74 0.2360 0.2471 0.2838 5.69e-04 6r6b-a1-m1-cH_6r6b-a1-m1-cI
9 5jvl-a2-m1-cB 520 39 0.1573 0.0269 0.3590 0.44 5jvl-a2-m1-cB_5jvl-a2-m1-cC
10 5lu4-a2-m1-cB 847 39 0.1573 0.0165 0.3590 0.45 5lu4-a2-m1-cB_5lu4-a2-m3-cA
11 5lu4-a2-m3-cA 850 39 0.1573 0.0165 0.3590 0.45 5lu4-a2-m1-cB_5lu4-a2-m3-cA
12 5jvl-a2-m1-cC 859 39 0.1573 0.0163 0.3590 0.45 5jvl-a2-m1-cB_5jvl-a2-m1-cC
13 6o77-a1-m1-cD 872 38 0.1573 0.0161 0.3684 0.99 6o77-a1-m1-cC_6o77-a1-m1-cD
14 6o77-a1-m1-cC 872 38 0.1573 0.0161 0.3684 0.99 6o77-a1-m1-cC_6o77-a1-m1-cD

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Reference:
Jacob Schwartz et al.

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