Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=59)
MTQLEEQLHNVETVRSITMQLEMALTKLKKDMMYQVWQRESKALESAIAIIHYVAGDLK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1zw0-a9-m1-cB 59 59 1.0000 1.0000 1.0000 5.50e-38 1zw0-a9-m1-cB_1zw0-a9-m1-cA, 1zw0-a9-m1-cB_1zw0-a9-m5-cH
2 1zw0-a8-m3-cB 59 59 1.0000 1.0000 1.0000 5.50e-38 1zw0-a8-m3-cB_1zw0-a8-m1-cH
3 1zw0-a6-m1-cB 59 59 1.0000 1.0000 1.0000 5.50e-38 1zw0-a6-m1-cB_1zw0-a6-m2-cA
4 1zw0-a9-m5-cH 66 66 1.0000 0.8939 0.8939 3.51e-35 1zw0-a9-m1-cB_1zw0-a9-m5-cH, 1zw0-a9-m5-cG_1zw0-a9-m5-cH
5 1zw0-a8-m1-cH 66 66 1.0000 0.8939 0.8939 3.51e-35 1zw0-a8-m1-cC_1zw0-a8-m1-cH, 1zw0-a8-m1-cD_1zw0-a8-m1-cH, 1zw0-a8-m3-cB_1zw0-a8-m1-cH
6 1zw0-a8-m1-cD 66 66 1.0000 0.8939 0.8939 3.51e-35 1zw0-a8-m1-cD_1zw0-a8-m1-cH, 1zw0-a8-m1-cG_1zw0-a8-m1-cD
7 1zw0-a6-m6-cH 66 66 1.0000 0.8939 0.8939 3.51e-35 1zw0-a6-m6-cE_1zw0-a6-m6-cH
8 1zw0-a9-m1-cA 65 65 0.9831 0.8923 0.8923 1.76e-34 1zw0-a9-m1-cB_1zw0-a9-m1-cA, 1zw0-a9-m1-cC_1zw0-a9-m1-cA, 1zw0-a9-m9-cF_1zw0-a9-m1-cA
9 1zw0-a7-m7-cE 65 65 0.9831 0.8923 0.8923 1.76e-34 1zw0-a7-m5-cG_1zw0-a7-m7-cE
10 1zw0-a6-m6-cE 65 65 0.9831 0.8923 0.8923 1.76e-34 1zw0-a6-m6-cE_1zw0-a6-m6-cH
11 1zw0-a6-m2-cA 65 65 0.9831 0.8923 0.8923 1.76e-34 1zw0-a6-m1-cB_1zw0-a6-m2-cA
12 1zw0-a9-m5-cG 54 57 0.9153 1.0000 0.9474 6.36e-32 1zw0-a9-m5-cG_1zw0-a9-m5-cH
13 1zw0-a8-m1-cG 54 57 0.9153 1.0000 0.9474 6.36e-32 1zw0-a8-m1-cG_1zw0-a8-m1-cD
14 1zw0-a7-m5-cG 54 57 0.9153 1.0000 0.9474 6.36e-32 1zw0-a7-m5-cG_1zw0-a7-m7-cE
15 1zw0-a9-m9-cF 52 59 0.8814 1.0000 0.8814 5.44e-29 1zw0-a9-m9-cF_1zw0-a9-m1-cA
16 1zw0-a9-m1-cC 52 52 0.8475 0.9615 0.9615 8.20e-28 1zw0-a9-m1-cC_1zw0-a9-m1-cA
17 1zw0-a8-m1-cC 52 52 0.8475 0.9615 0.9615 8.20e-28 1zw0-a8-m1-cC_1zw0-a8-m1-cH

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600