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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=92)
MTRFFTKLDADKSYQCLKETCEKLGYQWKKSCMNQVTISTTDRRNNKLIFKVNLLEMDDK
ILVDFRLSKGDGLEFKRHFLKIKGKLIDIVSS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5wi2-a3-m1-cB 93 92 1.0000 0.9892 1.0000 1.89e-63 5wi2-a3-m2-cA_5wi2-a3-m1-cB
2 5wi2-a3-m2-cA 92 92 1.0000 1.0000 1.0000 2.23e-63 5wi2-a3-m2-cA_5wi2-a3-m1-cB
3 1zes-a2-m1-cB 118 28 0.1304 0.1017 0.4286 0.68 1zes-a2-m1-cB_1zes-a2-m1-cC
4 3r9t-a1-m1-cB 262 43 0.1196 0.0420 0.2558 1.0 3r9t-a1-m1-cA_3r9t-a1-m1-cB
5 3r9t-a1-m1-cA 260 43 0.1196 0.0423 0.2558 1.0 3r9t-a1-m1-cA_3r9t-a1-m1-cB
6 7nie-a1-m1-cP 487 37 0.1304 0.0246 0.3243 1.2 7nie-a1-m1-cO_7nie-a1-m1-cP
7 7nie-a1-m1-cO 487 37 0.1304 0.0246 0.3243 1.2 7nie-a1-m1-cO_7nie-a1-m1-cP
8 6oap-a1-m1-cB 303 17 0.1087 0.0330 0.5882 4.7 6oap-a1-m1-cB_6oap-a1-m1-cA
9 6oap-a1-m1-cA 305 17 0.1087 0.0328 0.5882 4.7 6oap-a1-m1-cB_6oap-a1-m1-cA
10 4i5i-a3-m1-cB 272 23 0.0978 0.0331 0.3913 7.9 4i5i-a3-m1-cA_4i5i-a3-m1-cB
11 4i5i-a3-m1-cA 272 23 0.0978 0.0331 0.3913 7.9 4i5i-a3-m1-cA_4i5i-a3-m1-cB
12 2iyn-a5-m2-cC 108 21 0.0978 0.0833 0.4286 8.4 2iyn-a5-m1-cC_2iyn-a5-m2-cC
13 2iyn-a5-m1-cC 108 21 0.0978 0.0833 0.4286 8.4 2iyn-a5-m1-cC_2iyn-a5-m2-cC

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Reference:
Jacob Schwartz et al.

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