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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=81)
MTVRLDQQTRQRLQDIVKGGYRSANAAIVDAINKRWEALHDEQLDAAYAAAIHDNPAYPY
ESEAERSAARARRNARQQRSA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5xe3-a1-m1-cF 81 81 1.0000 1.0000 1.0000 8.32e-54 5xe3-a1-m1-cE_5xe3-a1-m1-cF
2 5xe3-a1-m1-cE 81 81 1.0000 1.0000 1.0000 8.32e-54 5xe3-a1-m1-cE_5xe3-a1-m1-cF
3 3d1c-a1-m2-cA 350 24 0.1481 0.0343 0.5000 1.5 3d1c-a1-m1-cA_3d1c-a1-m2-cA
4 3d1c-a1-m1-cA 350 24 0.1481 0.0343 0.5000 1.5 3d1c-a1-m1-cA_3d1c-a1-m2-cA
5 2oga-a3-m1-cD 370 33 0.1728 0.0378 0.4242 1.8 2oga-a3-m1-cD_2oga-a3-m1-cA
6 2oge-a2-m1-cC 368 33 0.1728 0.0380 0.4242 1.8 2oge-a2-m1-cD_2oge-a2-m1-cC
7 2oge-a2-m1-cD 367 33 0.1728 0.0381 0.4242 1.8 2oge-a2-m1-cD_2oge-a2-m1-cC
8 2oga-a3-m1-cC 369 33 0.1728 0.0379 0.4242 1.8 2oga-a3-m1-cC_2oga-a3-m1-cA
9 2oga-a3-m1-cA 371 33 0.1728 0.0377 0.4242 1.8 2oga-a3-m1-cC_2oga-a3-m1-cA, 2oga-a3-m1-cD_2oga-a3-m1-cA
10 7see-a1-m1-cF 719 79 0.3086 0.0348 0.3165 2.7 7see-a1-m1-cE_7see-a1-m1-cF
11 7see-a1-m1-cE 719 79 0.3086 0.0348 0.3165 2.7 7see-a1-m1-cE_7see-a1-m1-cF
12 8h8c-a1-m1-cB 964 23 0.0988 0.0083 0.3478 5.8 8h8c-a1-m1-cA_8h8c-a1-m1-cB
13 8h8c-a1-m1-cA 964 23 0.0988 0.0083 0.3478 5.8 8h8c-a1-m1-cA_8h8c-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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