Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=88)
MTYRVKIHKQVVKALQSLPKAHYRRFLEFRDILEYEPVPREKFDVIKLEGTGDLDLYRAR
LGDYRVIYSVNWKDKVIKILKLKPRGRA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1wmi-a3-m3-cC 88 88 1.0000 1.0000 1.0000 8.21e-60 1wmi-a3-m1-cA_1wmi-a3-m3-cC
2 1wmi-a3-m1-cA 88 88 1.0000 1.0000 1.0000 8.21e-60 1wmi-a3-m1-cA_1wmi-a3-m3-cC
3 1s7g-a1-m1-cD 240 63 0.1818 0.0667 0.2540 2.1 1s7g-a1-m1-cD_1s7g-a1-m1-cA
4 1s7g-a1-m1-cC 252 63 0.1818 0.0635 0.2540 2.3 1s7g-a1-m1-cA_1s7g-a1-m1-cC
5 1s7g-a1-m1-cB 252 63 0.1818 0.0635 0.2540 2.3 1s7g-a1-m1-cA_1s7g-a1-m1-cB, 1s7g-a1-m1-cE_1s7g-a1-m1-cB
6 1s7g-a1-m1-cA 252 63 0.1818 0.0635 0.2540 2.3 1s7g-a1-m1-cA_1s7g-a1-m1-cB, 1s7g-a1-m1-cA_1s7g-a1-m1-cC, 1s7g-a1-m1-cD_1s7g-a1-m1-cA
7 3wid-a1-m1-cC 358 36 0.1705 0.0419 0.4167 2.3 3wid-a1-m1-cC_3wid-a1-m1-cD
8 3wid-a1-m1-cD 360 36 0.1705 0.0417 0.4167 2.4 3wid-a1-m1-cB_3wid-a1-m1-cD, 3wid-a1-m1-cC_3wid-a1-m1-cD
9 3wid-a1-m1-cB 360 36 0.1705 0.0417 0.4167 2.4 3wid-a1-m1-cB_3wid-a1-m1-cD
10 2zds-a1-m1-cF 318 39 0.1705 0.0472 0.3846 3.2 2zds-a1-m1-cD_2zds-a1-m1-cF, 2zds-a1-m1-cE_2zds-a1-m1-cF
11 2zds-a1-m1-cD 318 39 0.1705 0.0472 0.3846 3.2 2zds-a1-m1-cD_2zds-a1-m1-cF
12 2zds-a1-m1-cE 317 39 0.1705 0.0473 0.3846 3.4 2zds-a1-m1-cE_2zds-a1-m1-cF

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600