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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=97)
MVDFAFALRKAQDTGKIVMGARKSIQYAKMGGAKLIIVARNARPDIKEDIEYYARLSGIP
VYEFEGTSVELGTLLGRPHTVSALAVVDPGESAILAL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3ra5-a1-m1-cB 97 97 1.0000 1.0000 1.0000 7.56e-67 3ra5-a1-m1-cA_3ra5-a1-m1-cB
2 3ra5-a1-m1-cA 97 97 1.0000 1.0000 1.0000 7.56e-67 3ra5-a1-m1-cA_3ra5-a1-m1-cB
3 3cpq-a1-m1-cA 99 96 0.4536 0.4444 0.4583 9.43e-28 3cpq-a1-m1-cA_3cpq-a1-m1-cB
4 3cpq-a1-m1-cB 101 96 0.4536 0.4356 0.4583 9.66e-28 3cpq-a1-m1-cA_3cpq-a1-m1-cB
5 3vi6-a2-m3-cA 97 88 0.3505 0.3505 0.3864 1.60e-18 3vi6-a2-m2-cA_3vi6-a2-m3-cA
6 3vi6-a2-m2-cA 97 88 0.3505 0.3505 0.3864 1.60e-18 3vi6-a2-m2-cA_3vi6-a2-m3-cA
7 2ffh-a9-m4-cA 407 60 0.1856 0.0442 0.3000 0.13 2ffh-a9-m1-cB_2ffh-a9-m4-cA
8 2ffh-a9-m1-cB 407 60 0.1856 0.0442 0.3000 0.13 2ffh-a9-m1-cB_2ffh-a9-m4-cA
9 2ffh-a7-m1-cC 407 60 0.1856 0.0442 0.3000 0.13 2ffh-a7-m1-cB_2ffh-a7-m1-cC
10 2ffh-a7-m1-cB 407 60 0.1856 0.0442 0.3000 0.13 2ffh-a7-m1-cB_2ffh-a7-m1-cC
11 2ffh-a6-m5-cB 407 60 0.1856 0.0442 0.3000 0.13 2ffh-a6-m4-cC_2ffh-a6-m5-cB
12 2ffh-a6-m4-cC 407 60 0.1856 0.0442 0.3000 0.13 2ffh-a6-m4-cC_2ffh-a6-m5-cB
13 7yeo-a1-m1-cB 382 43 0.1856 0.0471 0.4186 2.1 7yeo-a1-m1-cA_7yeo-a1-m1-cB
14 7yeo-a1-m1-cA 381 42 0.1856 0.0472 0.4286 2.7 7yeo-a1-m1-cA_7yeo-a1-m1-cB
15 7tlp-a4-m3-cF 396 98 0.2577 0.0631 0.2551 4.6 7tlp-a4-m1-cF_7tlp-a4-m3-cF
16 7tlp-a4-m1-cF 396 98 0.2577 0.0631 0.2551 4.6 7tlp-a4-m1-cF_7tlp-a4-m3-cF
17 4fp4-a1-m1-cA 243 31 0.1237 0.0494 0.3871 5.9 4fp4-a1-m1-cB_4fp4-a1-m1-cA
18 7qtq-a1-m1-cB 1787 67 0.1959 0.0106 0.2836 9.1 7qtq-a1-m1-cB_7qtq-a1-m1-cA
19 7qtq-a1-m1-cA 1788 67 0.1959 0.0106 0.2836 9.1 7qtq-a1-m1-cB_7qtq-a1-m1-cA
20 7n4y-a1-m1-cB 2452 67 0.1959 0.0077 0.2836 9.2 7n4y-a1-m1-cA_7n4y-a1-m1-cB
21 7n4y-a1-m1-cA 2452 67 0.1959 0.0077 0.2836 9.2 7n4y-a1-m1-cA_7n4y-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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