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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=85)
MVKEVNVPDIVEVTEVMVKVGDKVAAEQSLITVEGDKASMEVPAPFAGVVKELKVNVGDK
VKTGSLIMIFEVEGAAPAAAPAKQE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2k7v-a1-m1-cB 85 85 1.0000 1.0000 1.0000 1.88e-53 2k7v-a1-m1-cA_2k7v-a1-m1-cB
2 2k7v-a1-m1-cA 85 85 1.0000 1.0000 1.0000 1.88e-53 2k7v-a1-m1-cA_2k7v-a1-m1-cB
3 3hbl-a1-m1-cA 1131 56 0.3059 0.0230 0.4643 6.82e-09 3hbl-a1-m1-cB_3hbl-a1-m1-cA
4 3hbl-a1-m1-cB 1074 56 0.3059 0.0242 0.4643 7.22e-09 3hbl-a1-m1-cB_3hbl-a1-m1-cA
5 5ks8-a1-m1-cD 580 49 0.2235 0.0328 0.3878 0.028 5ks8-a1-m1-cD_5ks8-a1-m1-cC
6 5ks8-a1-m1-cD 580 24 0.1294 0.0190 0.4583 0.91 5ks8-a1-m1-cD_5ks8-a1-m1-cC
7 5ks8-a1-m1-cC 603 49 0.2235 0.0315 0.3878 0.029 5ks8-a1-m1-cD_5ks8-a1-m1-cC
8 5ks8-a1-m1-cC 603 24 0.1294 0.0182 0.4583 0.93 5ks8-a1-m1-cD_5ks8-a1-m1-cC
9 8beg-a1-m1-cA 650 55 0.2118 0.0277 0.3273 0.19 8beg-a1-m1-cB_8beg-a1-m1-cA
10 8beg-a1-m1-cB 649 55 0.2118 0.0277 0.3273 0.19 8beg-a1-m1-cB_8beg-a1-m1-cA
11 5nen-a1-m1-cA 266 36 0.1765 0.0564 0.4167 0.40 5nen-a1-m1-cB_5nen-a1-m1-cA
12 4je0-a1-m1-cA 307 50 0.2000 0.0554 0.3400 2.5 4je0-a1-m1-cA_4je0-a1-m1-cB
13 4je0-a1-m1-cB 309 50 0.2000 0.0550 0.3400 2.5 4je0-a1-m1-cA_4je0-a1-m1-cB
14 3vyg-a1-m1-cJ 120 28 0.1294 0.0917 0.3929 4.9 3vyg-a1-m1-cA_3vyg-a1-m1-cJ
15 3vyg-a1-m1-cA 120 28 0.1294 0.0917 0.3929 4.9 3vyg-a1-m1-cA_3vyg-a1-m1-cJ
16 3lnn-a4-m4-cB 245 51 0.1882 0.0653 0.3137 7.4 3lnn-a4-m3-cB_3lnn-a4-m4-cB, 3lnn-a4-m4-cB_3lnn-a4-m2-cA, 3lnn-a4-m4-cB_3lnn-a4-m4-cA
17 3lnn-a4-m3-cB 245 51 0.1882 0.0653 0.3137 7.4 3lnn-a4-m3-cB_3lnn-a4-m4-cB
18 3lnn-a4-m4-cA 341 51 0.1882 0.0469 0.3137 8.5 3lnn-a4-m1-cA_3lnn-a4-m4-cA, 3lnn-a4-m2-cA_3lnn-a4-m4-cA, 3lnn-a4-m3-cA_3lnn-a4-m4-cA, 3lnn-a4-m4-cB_3lnn-a4-m4-cA
19 3lnn-a4-m3-cA 341 51 0.1882 0.0469 0.3137 8.5 3lnn-a4-m3-cA_3lnn-a4-m4-cA
20 3lnn-a4-m2-cA 341 51 0.1882 0.0469 0.3137 8.5 3lnn-a4-m2-cA_3lnn-a4-m4-cA, 3lnn-a4-m4-cB_3lnn-a4-m2-cA
21 3lnn-a4-m1-cA 341 51 0.1882 0.0469 0.3137 8.5 3lnn-a4-m1-cA_3lnn-a4-m4-cA

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Reference:
Jacob Schwartz et al.

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