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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=80)
MVKVKFKYKGEEKEVDTSKIKKVWRVGKMVSFTYDDNGKTGRGAVSEKDAPKELLDMLAR
AEREKKGVLKKLRAVENELH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1wvl-a1-m2-cB 80 80 1.0000 1.0000 1.0000 1.60e-52 1wvl-a1-m1-cA_1wvl-a1-m2-cB, 1wvl-a1-m1-cB_1wvl-a1-m2-cB, 1wvl-a1-m2-cA_1wvl-a1-m2-cB
2 1wvl-a1-m2-cA 80 80 1.0000 1.0000 1.0000 1.60e-52 1wvl-a1-m2-cA_1wvl-a1-m2-cB
3 1wvl-a1-m1-cB 80 80 1.0000 1.0000 1.0000 1.60e-52 1wvl-a1-m1-cB_1wvl-a1-m2-cB
4 1wvl-a1-m1-cA 80 80 1.0000 1.0000 1.0000 1.60e-52 1wvl-a1-m1-cA_1wvl-a1-m2-cB
5 2xiw-a1-m2-cB 66 65 0.6125 0.7424 0.7538 1.07e-24 2xiw-a1-m1-cA_2xiw-a1-m2-cB, 2xiw-a1-m1-cB_2xiw-a1-m2-cB, 2xiw-a1-m2-cA_2xiw-a1-m2-cB
6 2xiw-a1-m1-cB 66 65 0.6125 0.7424 0.7538 1.07e-24 2xiw-a1-m1-cB_2xiw-a1-m2-cB
7 2xiw-a1-m2-cA 63 64 0.6000 0.7619 0.7500 4.25e-24 2xiw-a1-m2-cA_2xiw-a1-m2-cB
8 2xiw-a1-m1-cA 63 64 0.6000 0.7619 0.7500 4.25e-24 2xiw-a1-m1-cA_2xiw-a1-m2-cB
9 1c94-a2-m2-cB 37 16 0.1750 0.3784 0.8750 0.009 1c94-a2-m2-cA_1c94-a2-m2-cB
10 1c94-a2-m2-cA 37 16 0.1750 0.3784 0.8750 0.009 1c94-a2-m2-cA_1c94-a2-m2-cB
11 7bra-a1-m1-cB 445 33 0.2000 0.0360 0.4848 1.9 7bra-a1-m1-cA_7bra-a1-m1-cB
12 7bra-a1-m1-cA 445 33 0.2000 0.0360 0.4848 1.9 7bra-a1-m1-cA_7bra-a1-m1-cB
13 7ej3-a1-m1-cB 401 47 0.1750 0.0349 0.2979 3.4 7ej3-a1-m1-cA_7ej3-a1-m1-cB
14 7ej3-a1-m1-cA 397 47 0.1750 0.0353 0.2979 3.5 7ej3-a1-m1-cA_7ej3-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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