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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=74)
MVNPISRLMQIQQARKEKEPVYTLVEERGVARRREFIMEVSASGKSATGIGPTKKLAKKE
AAENLLVMLGYGRS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7e4v-a1-m1-cA 74 74 1.0000 1.0000 1.0000 9.32e-49 7e4v-a1-m1-cA_7e4v-a1-m1-cB
2 7e4v-a1-m1-cB 75 74 1.0000 0.9867 1.0000 1.07e-48 7e4v-a1-m1-cA_7e4v-a1-m1-cB
3 1o0w-a1-m1-cA 238 56 0.3378 0.1050 0.4464 8.04e-04 1o0w-a1-m1-cA_1o0w-a1-m1-cB
4 1yyw-a2-m1-cD 219 62 0.2838 0.0959 0.3387 8.19e-04 1yyw-a2-m1-cC_1yyw-a2-m1-cD
5 1o0w-a1-m1-cB 239 56 0.3378 0.1046 0.4464 8.21e-04 1o0w-a1-m1-cA_1o0w-a1-m1-cB
6 4m30-a1-m1-cB 218 62 0.2838 0.0963 0.3387 8.43e-04 4m30-a1-m1-cB_4m30-a1-m1-cA
7 4m30-a1-m1-cA 220 62 0.2838 0.0955 0.3387 8.79e-04 4m30-a1-m1-cB_4m30-a1-m1-cA
8 1yyw-a2-m1-cC 218 62 0.2838 0.0963 0.3387 8.86e-04 1yyw-a2-m1-cC_1yyw-a2-m1-cD
9 7r97-a1-m1-cB 226 49 0.2162 0.0708 0.3265 0.034 7r97-a1-m1-cA_7r97-a1-m1-cB
10 7r97-a1-m1-cA 226 49 0.2162 0.0708 0.3265 0.034 7r97-a1-m1-cA_7r97-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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