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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=62)
MYKFEIYQDKAGEYRFRFKASNGETMFSSEGYKAKASAIHAIESIKRNSAGADTVDLTTM
TA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2k7i-a1-m1-cB 62 62 1.0000 1.0000 1.0000 1.17e-40 2k7i-a1-m1-cA_2k7i-a1-m1-cB
2 2k7i-a1-m1-cA 62 62 1.0000 1.0000 1.0000 1.17e-40 2k7i-a1-m1-cA_2k7i-a1-m1-cB
3 3bid-a4-m1-cH 56 47 0.3548 0.3929 0.4681 7.16e-11 3bid-a4-m1-cH_3bid-a4-m1-cG
4 3bid-a4-m1-cG 59 47 0.3548 0.3729 0.4681 9.34e-11 3bid-a4-m1-cH_3bid-a4-m1-cG
5 6q2z-a1-m1-cB 60 54 0.3710 0.3833 0.4259 2.44e-09 6q2z-a1-m1-cA_6q2z-a1-m1-cB
6 6q2z-a1-m1-cA 60 54 0.3710 0.3833 0.4259 2.44e-09 6q2z-a1-m1-cA_6q2z-a1-m1-cB
7 3ztv-a1-m2-cA 565 20 0.1613 0.0177 0.5000 0.62 3ztv-a1-m1-cA_3ztv-a1-m2-cA
8 3ztv-a1-m1-cA 565 20 0.1613 0.0177 0.5000 0.62 3ztv-a1-m1-cA_3ztv-a1-m2-cA
9 1y14-a1-m1-cB 154 23 0.1935 0.0779 0.5217 1.3 1y14-a1-m1-cB_1y14-a1-m1-cD
10 1y14-a1-m1-cD 160 23 0.1935 0.0750 0.5217 1.3 1y14-a1-m1-cB_1y14-a1-m1-cD
11 3j4u-a1-m9-cG 312 46 0.2581 0.0513 0.3478 9.5 3j4u-a1-m9-cG_3j4u-a1-m10-cF

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Reference:
Jacob Schwartz et al.

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